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View Structure Prediction Details

Protein: gi|17939134, gi|...
Organism: Agrobacterium tumefaciens str. C58
Length: 227 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|17939134, gi|....

Description E-value Query
Range
Subject
Range
gi|4836567 - gi|4836567|gb|AAD30487.1|AF126446_2 5 protein [Agrobacterium tumefaciens]
gi|4836567|gb|AA... - 5 protein [Agrobacterium tumefaciens]
320.0 [0..1] [226..1]
gi|16119821, gi|... - gi|16119821|ref|NP_396526.1| indole-3-lactate synthase [Agrobacterium tumefaciens str. C58], gi|1516...
gi|5042193 - gi|5042193|emb|CAB44638.1| hypothetical protein [Agrobacterium tumefaciens]
297.0 [0..1] [212..1]
gi|1814324 - gi|1814324|gb|AAB41873.1| 5 [Agrobacterium vitis]
293.0 [0..1] [226..1]
ROB2_AGRRH - Protein-tyrosine phosphatase RolB OS=Agrobacterium rhizogenes GN=rolB PE=4 SV=1
240.0 [0..7] [225..10]

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Predicted Domain #1
Region A:
Residues: [1-227]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYYERPVFDI VDTWEIRERE VLKPVLSVAE EDYCYFVQNT VASAQRSWVD LVANLFNSPD  60
   61 SDIDDALNRF ADAPCLHGPT LEPMNLILKG SPMYVYCSFE EMRSCATKRF YEGISNRGVV 120
  121 ICTVPPYAEG VTRDDMSVWQ NQACVNTCSG KNDLDAYIAF LPTSSLQESS YWHTKNGIYS 180
  181 FLAPSQTDAF CCEILCVGRA LFEDRSRKEK LRNCLLKLLN YRLKLLF

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 79.585027
Match: PF02027.8
Description: No description for PF02027.8 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle