YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|7471015
Organism:	Deinococcus radiodurans
Length:	454 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7471015.

Description	E-value	Query Range	Subject Range
gi\|119524573, gi... - gi\|119719453\|ref\|YP_919948.1\| 4-aminobutyrate aminotransferase [Thermofilum pendens Hrk 5], gi\|11952...	0.0	[11..452]	[4..439]
gi\|94555375, gi\|... - gi\|94985094\|ref\|YP_604458.1\| 4-aminobutyrate aminotransferase [Deinococcus geothermalis DSM 11300], ...	0.0	[1..453]	[1..457]
gi\|116621553, gi... - gi\|67932454\|ref\|ZP_00525597.1\| Aminotransferase class-III [Solibacter usitatus Ellin6076], gi\|678603...	0.0	[2..453]	[4..449]
gi\|42735351, gi\|... - gi\|42779435\|ref\|NP_976682.1\| 4-aminobutyrate aminotransferase [Bacillus cereus ATCC 10987], gi\|42735...	0.0	[1..451]	[11..457]
gi\|47076751 - gi\|47076751\|dbj\|BAD18295.1\| aminotransferase class-III [Geobacillus stearothermophilus]	0.0	[8..453]	[6..447]
gi\|65317747 - gi\|65317747\|ref\|ZP_00390706.1\| COG0160: 4-aminobutyrate aminotransferase and related aminotransferas...	0.0	[1..451]	[1..447]
gi\|47553759, gi\|... - gi\|47569576\|ref\|ZP_00240254.1\| 4-aminobutyrate aminotransferase [Bacillus cereus G9241], gi\|47553759...	0.0	[5..451]	[1..443]
gi\|254686709 - gi\|254686709\|ref\|ZP_05150567.1\| 4-aminobutyrate aminotransferase [Bacillus anthracis str. CNEVA-9066... gi\|254739066 - gi\|254739066\|ref\|ZP_05196768.1\| 4-aminobutyrate aminotransferase [Bacillus anthracis str. Western No... gi\|21398270 - ref\|NP_654255.1\| aminotran_3, Aminotransferase class-III [Bacillus anthracis str. A2012] gi\|254761905 - gi\|254761905\|ref\|ZP_05213754.1\| 4-aminobutyrate aminotransferase [Bacillus anthracis str. Australia ... gi\|254742312 - gi\|254742312\|ref\|ZP_05199998.1\| 4-aminobutyrate aminotransferase [Bacillus anthracis str. Kruger B] gi\|254756088 - gi\|254756088\|ref\|ZP_05208117.1\| 4-aminobutyrate aminotransferase [Bacillus anthracis str. Vollum] gi\|49183338, gi\|... - gi\|49183338\|ref\|YP_026590.1\| 4-aminobutyrate aminotransferase [Bacillus anthracis str. Sterne], gi\|4... gi\|47500740, gi\|... - gi\|47525592\|ref\|YP_016941.1\| 4-aminobutyrate aminotransferase [Bacillus anthracis str. 'Ames Ancesto... gi\|30260495, gi\|... - gi\|30260495\|ref\|NP_842872.1\| 4-aminobutyrate aminotransferase [Bacillus anthracis str. Ames], gi\|302...	0.0	[5..451]	[1..443]
gi\|112418458 - gi\|112418458\|gb\|ABI18141.1\| gamma-aminobutyrate transaminase [Bacillus thuringiensis] gi\|228950866, gi... - gi\|228950866\|ref\|ZP_04112989.1\| 4-aminobutyrate aminotransferase [Bacillus thuringiensis serovar kur...	0.0	[1..452]	[22..469]
gi\|75760014, gi\|... - gi\|75760014\|ref\|ZP_00740080.1\| 4-aminobutyrate aminotransferase [Bacillus thuringiensis serovar isra... gi\|228860615, gi... - gi\|228899040\|ref\|ZP_04063313.1\| 4-aminobutyrate aminotransferase [Bacillus thuringiensis IBL 4222], ...	0.0	[1..452]	[22..469]

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Predicted Domain #1

Region A:
Residues: [1-454]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTATQAKPRQ PDLKTSLPGP KTAEIMARDQ ATLSTSYMRP YPFVPDFGKG VWLTDVDGNT  60
   61 MLDFFAGIAV STTGHAHPHV VQAVQRQIEK FTHVCLTDYP QEITTSLAER LVKHVERPGE 120
  121 KWRVFFSNSG AEAVEAAVKL ARNHTGRQHI ISTMGSFHGR TYGAITLTGS KTKYKRGFGP 180
  181 LLPAVSHVPY PNPFRPPLGS TPENCGQAVI DHIESLFVGI LPADEVAAII VEPMQGEGGY 240
  241 IVPPADFLPG LRALCDKHGI MLIFDEVQAG MGRTGKMFSF QHFDVQPDII TSAKGIASGM 300
  301 PLGALLAKES VMTWPVGSHG STYGGNPVAA AASHATLDLL EGQVKHEGCG DSLMDNAAQV 360
  361 GDFILGELKG MQDEFPFIGD VRGRGLFIGI EFVKPDGSPD GALRDQASMM MFEKGLLNLD 420
  421 CGEAVIRISP PLILTREEAA TGLDIMRGVF QELK

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	91.154902
Match:	2eo5A
Description:	No description for 2eo5A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits