YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|7471077
Organism:	Deinococcus radiodurans
Length:	110 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7471077.

Description	E-value	Query Range	Subject Range
gi\|75907835, gi\|... - gi\|75907835\|ref\|YP_322131.1\| non-ribosomal peptide synthase [Anabaena variabilis ATCC 29413], gi\|757...	5.0E-21	[7..110]	[1038..1140]
gi\|65336268 - gi\|65336268\|gb\|AAY42397.1\| HctE [Lyngbya majuscula]	5.0E-21	[3..107]	[3237..3335]
gi\|163943331, gi... - gi\|89203969\|ref\|ZP_01182548.1\| Amino acid adenylation [Bacillus weihenstephanensis KBAB4], gi\|891581...	6.0E-21	[1..110]	[931..1044]
TYCC_BREPA - Tyrocidine synthase 3 OS=Brevibacillus parabrevis GN=tycC PE=1 SV=1 gi\|2623773, gi\|7... - gi\|7522159\|pir\|\|T31076 tyrocidine synthetase 3 - Brevibacillus brevis, gi\|2623773\|gb\|AAC45930.1\| tyr...	2.0E-20	[3..107]	[940..1037]
gi\|29896138, gi\|... - gi\|30020587\|ref\|NP_832218.1\| peptide synthetase [Bacillus cereus ATCC 14579], gi\|29896138\|gb\|AAP0941...	2.0E-20	[1..110]	[470..582]
BACA_BACLI - Bacitracin synthase 1 OS=Bacillus licheniformis GN=bacA PE=3 SV=1	3.0E-20	[3..109]	[514..613]
gi\|6563399 - gi\|6563399\|gb\|AAF17280.1\| NosC [Nostoc sp. GSV224]	3.0E-20	[1..110]	[3197..3300]
gi\|82502195 - gi\|82502195\|gb\|ABB80123.1\| SubA [Bacillus subtilis]	4.0E-20	[3..109]	[514..613]

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Predicted Domain #1

Region A:
Residues: [1-110]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTEAGGSLHP VQPCAPASAR RVHCGHFSFR RNLVMATFDD VKDVIVDKLG VDEGKVTPEA  60
   61 RFVEDLGADS LETVELIMGL EDKFGVTIPD EAAETIRTVQ AAVDYIDNNQ

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	17.69897
Match:	2ehsA
Description:	No description for 2ehsA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits