YRC Public Data Repository - Protein Structure Prediction

Protein:	MINE_BUCAI
Organism:	Buchnera aphidicola str. APS (Acyrthosiphon pisum)
Length:	83 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MINE_BUCAI.

Description	E-value	Query Range	Subject Range
gi\|88820533, gi\|... - gi\|88857336\|ref\|ZP_01131979.1\| cell division topological specificity factor [Pseudoalteromonas tunic...	134.0	[0..1]	[83..1]
MINE_PECAS - Cell division topological specificity factor OS=Pectobacterium atrosepticum (strain SCRI 1043 / ATCC... MINE_ERWCT - Cell division topological specificity factor OS=Erwinia carotovora subsp. atroseptica GN=minE PE=3 S...	134.0	[0..1]	[83..1]
MINE_HAHCH - Cell division topological specificity factor OS=Hahella chejuensis (strain KCTC 2396) GN=minE PE=3 S...	132.0	[0..1]	[83..1]
MINE_PSEHT - Cell division topological specificity factor OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=m...	132.0	[0..1]	[83..1]
gi\|95109614 - gi\|95109614\|emb\|CAK14315.1\| cell division topological specificity factor MinE [Pseudomonas entomophi... MINE_PSEE4 - Cell division topological specificity factor OS=Pseudomonas entomophila (strain L48) GN=minE PE=3 SV...	132.0	[0..1]	[83..1]
MINE_SHEDO - Cell division topological specificity factor OS=Shewanella denitrificans (strain OS217 / ATCC BAA-10...	130.0	[0..1]	[83..1]
MINE_PHOLL - Cell division topological specificity factor OS=Photorhabdus luminescens subsp. laumondii (strain DS... MINE_PHOLL - Cell division topological specificity factor OS=Photorhabdus luminescens subsp. laumondii GN=minE PE...	130.0	[0..1]	[83..1]
gi\|49082426 - gi\|49082426\|gb\|AAT50613.1\| PA3245 [synthetic construct]	129.0	[0..1]	[83..1]
tr\|I7B9M4\|I7B9M4... - Cell division topological specificity factor OS=Pseudomonas putida (strain DOT-T1E) GN=minE PE=3 SV=... MINE_PSEP1 - Cell division topological specificity factor OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=minE... MINE_PSEPK - Cell division topological specificity factor OS=Pseudomonas putida (strain KT2440) GN=minE PE=3 SV=1 tr\|E4REQ1\|E4REQ1... - Cell division topological specificity factor OS=Pseudomonas putida (strain BIRD-1) GN=minE PE=3 SV=1 MINE_PSEPG - Cell division topological specificity factor OS=Pseudomonas putida (strain GB-1) GN=minE PE=3 SV=1	129.0	[0..1]	[83..1]
gi\|238788498, gi... - gi\|77973549\|ref\|ZP_00829096.1\| COG0851: Septum formation topological specificity factor [Yersinia fr... gi\|229894792, gi... - gi\|229894792\|ref\|ZP_04509972.1\| cell division topological specificity factor [Yersinia pestis Pestoi... MINE_YERPG - Cell division topological specificity factor OS=Yersinia pestis bv. Antiqua (strain Angola) GN=minE ... gi\|229897497, gi... - gi\|229897497\|ref\|ZP_04512653.1\| cell division topological specificity factor [Yersinia pestis biovar... MINE_YERP3 - Cell division topological specificity factor OS=Yersinia pseudotuberculosis serotype O:1b (strain IP... gi\|229898141, gi... - gi\|229898141\|ref\|ZP_04513290.1\| cell division topological specificity factor [Yersinia pestis biovar... gi\|238710173, gi... - gi\|238751611\|ref\|ZP_04613101.1\| Cell division topological specificity factor [Yersinia rohdei ATCC 4... gi\|238754881, gi... - gi\|238754881\|ref\|ZP_04616231.1\| Cell division topological specificity factor [Yersinia ruckeri ATCC ... gi\|238756990, gi... - gi\|238756990\|ref\|ZP_04618178.1\| Cell division topological specificity factor [Yersinia aldovae ATCC ... MINE_YERPA - Cell division topological specificity factor OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=minE... gi\|238698708, gi... - gi\|238762950\|ref\|ZP_04623917.1\| Cell division topological specificity factor [Yersinia kristensenii ... MINE_YERPN - Cell division topological specificity factor OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=min... gi\|238794477, gi... - gi\|77977706\|ref\|ZP_00833148.1\| COG0851: Septum formation topological specificity factor [Yersinia in... gi\|166210801, gi... - gi\|166210801\|ref\|ZP_02236836.1\| cell division topological specificity factor MinE [Yersinia pestis b... gi\|165991769, gi... - gi\|166009214\|ref\|ZP_02230112.1\| cell division topological specificity factor MinE [Yersinia pestis b... gi\|167420058, gi... - gi\|167420058\|ref\|ZP_02311811.1\| cell division topological specificity factor MinE [Yersinia pestis b... gi\|167401397, gi... - gi\|167401397\|ref\|ZP_02306894.1\| cell division topological specificity factor MinE [Yersinia pestis b... gi\|167469553 - gi\|167469553\|ref\|ZP_02334257.1\| cell division topological specificity factor MinE [Yersinia pestis F... gi\|167056416, gi... - gi\|167424534\|ref\|ZP_02316287.1\| cell division topological specificity factor MinE [Yersinia pestis b... MINE_YERPB - Cell division topological specificity factor OS=Yersinia pseudotuberculosis serotype IB (strain PB1/... MINE_YERPY - Cell division topological specificity factor OS=Yersinia pseudotuberculosis serotype O:3 (strain YPI... gi\|165913211, gi... - gi\|165938848\|ref\|ZP_02227402.1\| cell division topological specificity factor MinE [Yersinia pestis b... gi\|149365995, gi... - gi\|149365995\|ref\|ZP_01888030.1\| cell division topological specificity factor [Yersinia pestis CA88-4... gi\|165919624, gi... - gi\|165928341\|ref\|ZP_02224173.1\| cell division topological specificity factor MinE [Yersinia pestis b... gi\|15980087, gi\|... - gi\|218929183\|ref\|YP_002347058.1\| cell division topological specificity factor MinE [Yersinia pestis ... MINE_YERPE - Cell division topological specificity factor OS=Yersinia pestis GN=minE PE=3 SV=1 MINE_YERE8 - Cell division topological specificity factor OS=Yersinia enterocolitica serotype O:8 / biotype 1B (s... MINE_YERPP - Cell division topological specificity factor OS=Yersinia pestis (strain Pestoides F) GN=minE PE=3 SV... gi\|21959079, gi\|... - gi\|22126120\|ref\|NP_669543.1\| cell division topological specificity factor MinE [Yersinia pestis KIM]... MINE_YERPS - Cell division topological specificity factor OS=Yersinia pseudotuberculosis serotype I (strain IP329... MINE_YERPS - Cell division topological specificity factor OS=Yersinia pseudotuberculosis GN=minE PE=3 SV=1 gi\|45441721, gi\|... - gi\|45441721\|ref\|NP_993260.1\| cell division topological specificity factor MinE [Yersinia pestis biov...	129.0	[0..1]	[83..1]

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Predicted Domain #1

Region A:
Residues: [1-83]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALLDFFLSR NKNTANVAKE RLQIIVAEQR KYNNEPDYFP QLKREILSVI CKYVNIEPNM  60
   61 VTVQLDQKNE DISILELNII LPD

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	16.045757
Match:	1ev0A
Description:	Cell division protein MinE topological specificity domain
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits