YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|7459124, gi\|1...
Organism:	Mycobacterium tuberculosis
Length:	145 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7459124, gi|1....

Description	E-value	Query Range	Subject Range
gi\|13881575, gi\|... - gi\|15841342\|ref\|NP_336379.1\| hypothetical protein MT1922 [Mycobacterium tuberculosis CDC1551], gi\|13...	263.0	[0..1]	[145..12]
gi\|31793063, gi\|... - gi\|31793063\|ref\|NP_855556.1\| hypothetical protein Mb1904 [Mycobacterium bovis AF2122/97], gi\|3161865...	261.0	[0..1]	[145..1]
gi\|41396037, gi\|... - gi\|41407684\|ref\|NP_960520.1\| hypothetical protein MAP1586 [Mycobacterium avium subsp. paratuberculos...	250.0	[0..1]	[143..7]
gi\|92912738, gi\|... - gi\|92912738\|ref\|ZP_01281368.1\| conserved hypothetical protein [Mycobacterium sp. KMS], gi\|92443284\|g...	243.0	[0..3]	[142..30]
gi\|108770157, gi... - gi\|108799738\|ref\|YP_639935.1\| hypothetical protein Mmcs_2772 [Mycobacterium sp. MCS], gi\|108770157\|g... gi\|119868848, gi... - gi\|119868848\|ref\|YP_938800.1\| hypothetical protein Mkms_2816 [Mycobacterium sp. KMS], gi\|119694937\|g...	242.0	[0..1]	[142..1]
gi\|92907527, gi\|... - gi\|92907527\|ref\|ZP_01276307.1\| conserved hypothetical protein [Mycobacterium sp. JLS], gi\|92435827\|g...	241.0	[0..3]	[142..30]
gi\|48729903, gi\|... - gi\|77459955\|ref\|YP_349462.1\| hypothetical protein Pfl01_3733 [Pseudomonas fluorescens Pf0-1], gi\|773...	236.0	[0..6]	[142..8]
gi\|46188941, gi\|... - gi\|66045534\|ref\|YP_235375.1\| hypothetical protein Psyr_2294 [Pseudomonas syringae pv. syringae B728a...	233.0	[0..6]	[143..3]
gi\|15964216 - gi\|15964216\|ref\|NP_384569.1\| hypothetical protein SMc01703 [Sinorhizobium meliloti 1021] gi\|15073392 - gi\|15073392\|emb\|CAC41900.1\| Conserved hypothetical protein [Sinorhizobium meliloti 1021]	230.0	[0..6]	[143..4]
gi\|27352459, gi\|... - gi\|27379308\|ref\|NP_770837.1\| hypothetical protein bll4197 [Bradyrhizobium japonicum USDA 110], gi\|27...	226.0	[0..5]	[143..2]

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Predicted Domain #1

Region A:
Residues: [1-145]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSASDPFDL KRFVYAQAPV YRSVVEELRA GRKRGHWMWF VFPQLRGLGS SPLAVRYGIS  60
   61 SLEEAQAYLQ HDLLGPRLHE CTGLVNQVQG RSIEEIFGPP DDLKLCSSMT LFARATDANQ 120
  121 DFVALLAKYY GGGEDRRTVA LLAVT

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	70.522879
Match:	2jekA
Description:	No description for 2jekA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits