YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|31791533, gi\|...
Organism:	Mycobacterium bovis AF2122/97
Length:	214 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|31791533, gi|....

Description	E-value	Query Range	Subject Range
gi\|148821552, gi... - gi\|76785936\|ref\|ZP_00773099.1\| COG2050: Uncharacterized protein, possibly involved in aromatic compo... gi\|81255778 - gi\|81255778\|ref\|ZP_00880246.1\| COG2050: Uncharacterized protein, possibly involved in aromatic compo... gi\|15839742, gi\|... - gi\|15839742\|ref\|NP_334779.1\| hypothetical protein MT0372 [Mycobacterium tuberculosis CDC1551], gi\|13... gi\|215402104 - gi\|215402104\|ref\|ZP_03414285.1\| hypothetical protein Mtub0_00110 [Mycobacterium tuberculosis 02_1987... gi\|167968494 - gi\|167968494\|ref\|ZP_02550771.1\| hypothetical protein MtubH3_10861 [Mycobacterium tuberculosis H37Ra] gi\|215429176 - gi\|215429176\|ref\|ZP_03427095.1\| hypothetical protein MtubE_00410 [Mycobacterium tuberculosis EAS054] gi\|215409864 - gi\|215409864\|ref\|ZP_03418672.1\| hypothetical protein Mtub9_00755 [Mycobacterium tuberculosis 94_M424... gi\|215444441 - gi\|215444441\|ref\|ZP_03431193.1\| hypothetical protein MtubT_00417 [Mycobacterium tuberculosis T85]	191.0	[0..6]	[214..1]
gi\|254777214 - gi\|254777214\|ref\|ZP_05218730.1\| thioesterase family protein [Mycobacterium avium subsp. avium ATCC 2... gi\|118465301, gi... - gi\|118465301\|ref\|YP_883903.1\| thioesterase family protein [Mycobacterium avium 104], gi\|118166588\|gb... gi\|41398801, gi\|... - gi\|41409968\|ref\|NP_962804.1\| hypothetical protein MAP3870 [Mycobacterium avium subsp. paratuberculos...	184.0	[0..8]	[214..6]
gi\|15827057 - gi\|15827057\|ref\|NP_301320.1\| hypothetical protein ML0279 [Mycobacterium leprae TN] gi\|219932642, gi... - gi\|221229535\|ref\|YP_002502951.1\| hypothetical protein MLBr_00279 [Mycobacterium leprae Br4923], gi\|2... gi\|3129992, gi\|2... - gi\|3129992\|emb\|CAA18943.1\| hypothetical protein MLCB4.22c [Mycobacterium leprae], pir\|\|G86943 conser...	176.0	[0..4]	[214..5]
gi\|54018619, gi\|... - gi\|54027111\|ref\|YP_121353.1\| hypothetical protein nfa51370 [Nocardia farcinica IFM 10152], gi\|540186...	157.0	[0..12]	[214..36]
gi\|92909595, gi\|... - gi\|92909595\|ref\|ZP_01278372.1\| Thioesterase superfamily [Mycobacterium sp. JLS], gi\|92432762\|gb\|EAS9...	156.0	[0..2]	[214..3]
gi\|108767915, gi... - gi\|108797496\|ref\|YP_637693.1\| thioesterase superfamily protein [Mycobacterium sp. MCS], gi\|108767915... gi\|92916079, gi\|... - gi\|92916079\|ref\|ZP_01284700.1\| Thioesterase superfamily [Mycobacterium sp. KMS], gi\|92439763\|gb\|EAS9...	155.0	[0..2]	[214..3]
gi\|90205867, gi\|... - gi\|90205867\|ref\|ZP_01208505.1\| Thioesterase superfamily [Mycobacterium vanbaalenii PYR-1], gi\|901953...	154.0	[0..1]	[214..49]
gi\|111018995, gi... - gi\|111018995\|ref\|YP_701967.1\| hypothetical protein RHA1_ro02002 [Rhodococcus jostii RHA1], gi\|110818...	154.0	[0..1]	[214..1]
gi\|89320772, gi\|... - gi\|89338839\|ref\|ZP_01191604.1\| Thioesterase superfamily [Mycobacterium flavescens PYR-GCK], gi\|89320...	151.0	[0..2]	[214..24]

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Predicted Domain #1

Region A:
Residues: [1-214]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTDASVHPDE LDPEYHHHGG FPEYGPASPG AGFGQFVATM RRLQDLAVAA DPGDAVWDEA  60
   61 AERAAALVEL LSPFEADEGK APAGRTPGLP GMGSLLLPPW TVTRYGTDGV EMRGSFSRFH 120
  121 VGGNSAVHGG VLPLLFDHMF GMISHAAGRP ISRTAFLHVD YRRITPIDVP LIVRGRVTNT 180
  181 EGRKAFVCAE LFDSDETLLA EGNGLMVRLL PGQP

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	16.30103
Match:	2ov9A
Description:	No description for 2ov9A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits