YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|11347913
Organism:	Pseudomonas aeruginosa
Length:	101 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|11347913.

Description	E-value	Query Range	Subject Range
gi\|49075528 - gi\|49075528\|gb\|AAT49479.1\| PA2607 [synthetic construct]	135.0	[0..1]	[101..1]
gi\|68553314, gi\|... - gi\|68553314\|ref\|ZP_00592691.1\| DsrH like protein [Prosthecochloris aestuarii DSM 271], gi\|68239766\|g...	133.0	[0..5]	[101..2]
gi\|107102129 - gi\|107102129\|ref\|ZP_01366047.1\| hypothetical protein PaerPA_01003178 [Pseudomonas aeruginosa PACS2]	133.0	[0..1]	[101..1]
gi\|94414675, gi\|... - gi\|94414675\|ref\|ZP_01294533.1\| hypothetical protein PaerP_01003597 [Pseudomonas aeruginosa PA7], gi\|...	132.0	[0..1]	[101..1]
gi\|21673686, gi\|... - gi\|21673686\|ref\|NP_661751.1\| DsrH protein [Chlorobium tepidum TLS], gi\|21646806\|gb\|AAM72093.1\| dsrH ...	131.0	[0..5]	[101..2]
gi\|151567648, gi... - gi\|3228384\|gb\|AAC35398.1\| DsrH [Allochromatium vinosum], gi\|151567654\|pdb\|2HYB\|R Chain R, Crystal St... gi\|241776766, gi... - gi\|241776766\|ref\|ZP_04774042.1\| sulfur relay protein TusB/DsrH [Allochromatium vinosum DSM 180], gi\|...	131.0	[0..3]	[101..2]
tr\|Q87ZT4\|Q87ZT4... - DsrH family protein OS=Pseudomonas syringae pv. tomato (strain DC3000) GN=PSPTO_3340 PE=4 SV=1 gi\|28870504, gi\|... - gi\|28870504\|ref\|NP_793123.1\| DsrH family protein [Pseudomonas syringae pv. tomato str. DC3000], gi\|2...	127.0	[0..3]	[101..2]
gi\|63257106, gi\|... - gi\|66046399\|ref\|YP_236240.1\| DsrH like protein [Pseudomonas syringae pv. syringae B728a], gi\|6325710...	127.0	[0..3]	[101..2]
gi\|67935129, gi\|... - gi\|67935129\|ref\|ZP_00528153.1\| DsrH like protein [Chlorobium phaeobacteroides DSM 266], gi\|67776024\|...	123.0	[0..5]	[101..2]
gi\|71554208, gi\|... - gi\|71733655\|ref\|YP_275255.1\| dsrH family protein [Pseudomonas syringae pv. phaseolicola 1448A], gi\|7...	123.0	[0..3]	[101..2]

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Predicted Domain #1

Region A:
Residues: [1-101]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATTLHVLSR SPFNDGRLGS CLYLLNPGDG LLLCGDAVHA LLAGSHACQA LELMPAEIEL  60
   61 FALLEDLQAR GIEDVPARLV AVDYPGFVEL ATRFDKVNSW L

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	31.30103
Match:	2hy5C
Description:	No description for 2hy5C was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits