YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|11348799
Organism:	Pseudomonas aeruginosa
Length:	300 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|11348799.

Description	E-value	Query Range	Subject Range
gi\|49084842 - gi\|49084842\|gb\|AAT51233.1\| PA0193 [synthetic construct]	7.0E-76	[1..300]	[1..300]
gi\|32043351, gi\|... - gi\|32043351\|ref\|ZP_00140613.1\| COG2175: Probable taurine catabolism dioxygenase [Pseudomonas aerugin...	1.0E-75	[1..300]	[1..300]
gi\|152986871, gi... - gi\|94413540\|ref\|ZP_01293421.1\| hypothetical protein PaerP_01004715 [Pseudomonas aeruginosa PA7], gi\|...	1.0E-75	[1..300]	[1..300]
gi\|107099182 - gi\|107099182\|ref\|ZP_01363100.1\| hypothetical protein PaerPA_01000192 [Pseudomonas aeruginosa PACS2] gi\|194554287, gi... - gi\|84324575\|ref\|ZP_00972632.1\| COG2175: Probable taurine catabolism dioxygenase [Pseudomonas aerugin...	1.0E-75	[1..300]	[1..300]
gi\|68348015, gi\|... - gi\|70733716\|ref\|YP_257356.1\| taurine catabolism dioxygenase TauD [Pseudomonas fluorescens Pf-5], gi\|...	8.0E-75	[1..299]	[1..300]
gi\|77380444, gi\|... - gi\|77456441\|ref\|YP_345946.1\| taurine dioxygenase [Pseudomonas fluorescens Pf0-1], gi\|77380444\|gb\|ABA...	1.0E-74	[1..300]	[1..301]
gi\|75704251, gi\|... - gi\|75910526\|ref\|YP_324822.1\| taurine catabolism dioxygenase TauD/TfdA [Anabaena variabilis ATCC 2941...	2.0E-74	[11..299]	[3..291]
gi\|95108463, gi\|... - gi\|95108463\|emb\|CAK13157.1\| Alkylsulfatase AtsK [Pseudomonas entomophila L48], gi\|104779476\|ref\|YP_6... gi\|95108463 - gi\|95108463\|emb\|CAK13157.1\| Alkylsulfatase AtsK [Pseudomonas entomophila L48]	2.0E-74	[1..299]	[1..300]
gi\|23128488, gi\|... - gi\|23128488\|ref\|ZP_00110333.1\| COG2175: Probable taurine catabolism dioxygenase [Nostoc punctiforme ...	4.0E-74	[11..299]	[3..291]
ATSK_PSEPU - Alpha-ketoglutarate-dependent sulfate ester dioxygenase OS=Pseudomonas putida GN=atsK PE=1 SV=1	4.0E-74	[1..299]	[1..300]

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Predicted Domain #1

Region A:
Residues: [1-300]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNAAQALAT PVRLDIRPVA GRIGAEIRGV TLSGELDAAT VEAIQAALVR HKVIFFRDQS  60
   61 HLDDQTQEAF AHLLGEPVAH PTVPSREGTR FLLELDGAEG RRANSWHTDV TFVEAYPKAS 120
  121 ILRSVVAPES GGDTVWANTA SAYADLPAEL RELADRLWAV HSNEYDYAGV KPSASVEQLE 180
  181 NYRKVFTSTV YETEHPVVRV HPQSGERTLL LGHFVKRLKG LSQHDSAHLF AVLQGHVTRL 240
  241 ENTVRWRWQA GDVAIWDNRA TQHYAIDDYG DQPRVVRRVT LGGDVPVGID GQRSRTIRKA 300
  301

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	75.69897
Match:	1oihA
Description:	Crystal structure of the alkylsulfatase AtsK, a non-heme Fe(II) alphaketoglutarate dependent Dioxygenase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	1.41007985416065	bayes_pls_golite062009
catalytic activity	1.29176034651701	bayes_pls_golite062009
oxidoreductase activity	0.95783232811757	bayes_pls_golite062009
taurine dioxygenase activity	0.594076608400231	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: