YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|7451675
Organism:	Aquifex aeolicus
Length:	212 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7451675.

Description	E-value	Query Range	Subject Range
gi\|134299758, gi... - gi\|88944800\|ref\|ZP_01148024.1\| Phosphoglycerate mutase/fructose-2,6-bisphosphatase [Desulfotomaculum...	210.0	[0..2]	[203..4]
gi\|146273747, gi... - gi\|98662370\|dbj\|GAA00697.1\| unnamed protein product [Pelotomaculum thermopropionicum SI], gi\|1476776...	204.0	[0..3]	[201..4]
gi\|15026080, gi\|... - gi\|15896273\|ref\|NP_349622.1\| phosphoglycerate mutase [Clostridium acetobutylicum ATCC 824], gi\|15026... gi\|25331550 - pir\|\|G97271 probable phosphoglycerate mutase [imported] - Clostridium acetobutylicum	196.0	[0..2]	[209..3]
gi\|67917134, gi\|... - gi\|67917134\|ref\|ZP_00510806.1\| Phosphoglycerate/bisphosphoglycerate mutase [Clostridium thermocellum...	194.0	[0..1]	[204..35]
gi\|83572867, gi\|... - gi\|83589953\|ref\|YP_429962.1\| phosphoglycerate mutase [Moorella thermoacetica ATCC 39073], gi\|8357286...	192.0	[0..2]	[204..4]
gi\|20807793, gi\|... - gi\|20807793\|ref\|NP_622964.1\| phosphoglycerate mutase/fructose-2,6-bisphosphatase [Thermoanaerobacter... gi\|20807793 - gi\|20807793\|ref\|NP_622964.1\| Phosphoglycerate mutase/fructose-2,6-bisphosphatase [Thermoanaerobacter...	192.0	[0..1]	[204..2]
gi\|11761356 - gi\|11761356\|dbj\|BAB19263.1\| phosphoglycerate mutase [Thermosynechococcus elongatus BP-1]	187.0	[0..3]	[210..197]
gi\|242231833, gi... - gi\|242256669\|ref\|ZP_04801556.1\| Phosphoglycerate mutase [Thermoanaerobacter sp. X513], gi\|242231833\|... gi\|166854478, gi... - gi\|167040238\|ref\|YP_001663223.1\| phosphoglycerate mutase [Thermoanaerobacter sp. X514], gi\|166854478...	187.0	[0..2]	[208..3]
gi\|76588241, gi\|... - gi\|76796379\|ref\|ZP_00778742.1\| Phosphoglycerate/bisphosphoglycerate mutase [Thermoanaerobacter ethan... gi\|241884465, gi... - gi\|241903241\|ref\|ZP_04787968.1\| Phosphoglycerate mutase [Thermoanaerobacter brockii subsp. finnii Ak...	187.0	[0..2]	[208..3]

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Predicted Domain #1

Region A:
Residues: [1-212]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKLIVVRHA ESEWNPIGRY QGLLDPDLTE RGVEQARRLA KALKKENIQV LFSSPLKRTF  60
   61 KTAKIIGEEI GLEPIPEERV IEIDHGKWSG LLVEEVKQKF PKEFEKWLKE PHRVKFEGGE 120
  121 SLLDVFKRVK NFLEFLLKNY NEKTVAVVSH TVPIRCLYCA VLDIDLSKFW SFGCDNASYS 180
  181 VVYLDSEGRN VIQKLNITCH LGDLYVEAHK AL

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	45.0
Match:	1h2eA
Description:	Broad specificity phosphatase PhoE (YhfR)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
phosphoglycerate mutase activity	2.44130212442914	bayes_pls_golite062009
catalytic activity	1.74758487942433	bayes_pls_golite062009
phosphofructokinase activity	1.32754415318102	bayes_pls_golite062009
intramolecular transferase activity, phosphotransferases	1.3155280505393	bayes_pls_golite062009
6-phosphofructo-2-kinase activity	0.940317463927411	bayes_pls_golite062009
hydrolase activity	0.849651362333977	bayes_pls_golite062009
isomerase activity	0.78897146524644	bayes_pls_golite062009
fructose-2,6-bisphosphate 2-phosphatase activity	0.65789048948205	bayes_pls_golite062009
hydrolase activity, acting on ester bonds	0.60968648160451	bayes_pls_golite062009
carbohydrate kinase activity	0.31535814970436	bayes_pls_golite062009
intramolecular transferase activity	0.31181714941139	bayes_pls_golite062009
alpha-ribazole-5'-P phosphatase activity	0.174640929208739	bayes_pls_golite062009
carbohydrate phosphatase activity	0.11293479631677	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: