YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|50876698, gi|...
Organism: Desulfotalea psychrophila LSv54
Length: 285 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|50876698, gi|....

Description E-value Query
Range
Subject
Range
gi|56421641, gi|... - gi|56421641|ref|YP_148959.1| peptide chain release factor 2 in translation [Geobacillus kaustophilus...
417.0 [0..1] [283..42]

Back

Predicted Domain #1
Region A:
Residues: [1-285]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLEMAAEEG DQEIEQEIAL KLGSFANALA AIELECMFIG EHDSCNAIIS IHAGAGGTEA  60
   61 QDWTDILLRM YLRWAERHKF KTEILDLLPG DEAGTKSITI LIKGQWAYGY LRSELGIHRL 120
  121 VRISPFDTSG RRHTSFASVM VMPELDNTVD VDIDEKDLRV DTYRASGAGG QHVNKTDSAI 180
  181 RLTHLPTGVV VQCQNERSQH RNKEMAMKML IAQIYQLEKQ KKADQQEGLH GEKKGISWGS 240
  241 QIRSYVLQPY RLIKDHRTDF EAGNVDAVLD GGLDGFIKAF LLWGK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 111.0
Match: 1gqeA
Description: Polypeptide chain release factor 2 (RF2)
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle