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View Structure Prediction Details

Protein: ALAE_PHOPR
Organism: Photobacterium profundum
Length: 159 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ALAE_PHOPR.

Description E-value Query
Range
Subject
Range
gi|90326860, gi|... - gi|90412136|ref|ZP_01220142.1| putative inner membrane protein [Photobacterium profundum 3TCK], gi|9...
264.0 [0..1] [159..1]

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Predicted Domain #1
Region A:
Residues: [1-159]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVKGQFNMR NAAADTFAMV IFSFITGMMI EVFVSGMTFE QSLASRTLSI PVNIAIAWPY  60
   61 GVFRDYLLRT GHRLSPSSWM KGLSDMVAYV LFQSPVYACI LLAVGAGTDQ IITAVTSNAF 120
  121 VSGALGIVYG QFLDACRRMF KVPGYCRELS HPEPQHQEM

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 95.30103
Match: PF06610.4
Description: No description for PF06610.4 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle