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View Structure Prediction Details

Protein: gi|50903558, gi|...
Organism: Streptococcus pyogenes MGAS10394
Length: 395 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|50903558, gi|....

Description E-value Query
Range
Subject
Range
gi|125714360, gi... - gi|67916088|ref|ZP_00509810.1| Phage major capsid protein, HK97 family [Clostridium thermocellum ATC...
353.0 [0..1] [394..1]

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Predicted Domain #1
Region A:
Residues: [1-122]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDKILELREK RAKVWDKAKN FLDSCRDEKG MISQEDSEHY DKLEQEVVDL GKEIDRLERQ  60
   61 ERIERELSQA TSAAIVSQPR TDAGGDEKTG TASTVYNQSF WKNVRQKNFF DVNNTLNIGN 120
  121 DG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 4.09691
Match: 2i1jA
Description: No description for 2i1jA was found.

Predicted Domain #2
Region A:
Residues: [123-395]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QGGYLVPDEY ENRLIKALEE ENFFRRLATI IKTSNGERKI PVVTGHGTAA WMDENGTYPE  60
   61 SEETFGQVTL GAYKVGTAIK ISEELIHDSV FDLESYMAEE FARRIGSKEE EAFLIGDGSG 120
  121 KPTGVFTTVT EGVTSTGANI TFDDVMDLYH SLKSPYRKNS VWILNDSTIK ALRKLKDNNG 180
  181 NYIWQPSVQA GVPDMILNRP YYTSSYAPEI ASGQKVLAFG DFSHYWISDR QGRSFKRLNE 240
  241 LYATSGQVGF LGSQRVDGKL VLPEAVKVLT MKG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 50.69897
Match: 2gp1A
Description: No description for 2gp1A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle