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View Structure Prediction Details

Protein: gi|50903547, gi|...
Organism: Streptococcus pyogenes MGAS10394
Length: 760 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|50903547, gi|....

Description E-value Query
Range
Subject
Range
gi|50261628, gi|... - gi|50261628|gb|AAT72396.1| unknown [Streptococcus pyogenes], gi|40218583|gb|AAR83237.1| phage tail-h...
1029.0 [0..1] [760..1]

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Predicted Domain #1
Region A:
Residues: [1-284]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADYGSNNDR GYNLLLRVEE TGTSTANNTS TVRVQLWLRN GQTTFGMYNC SASVSIDGQT  60
   61 LSWSGRPDMY SMNSSLHLID KTITIAHNSN GQKTIGFSAT FSGSGGWSPG TLNTGYQSLR 120
  121 LRDIPRSSTA SVSGNMMGSP ITISITRASG DFTHKVTWQF GSLSGVVATG ATTSCSWTPE 180
  181 VAKLAPQIPN ATSGIGTILV QTIYGGKVIG ESRIQVTLQL PSSVVPSLSS ISLSDLNTIA 240
  241 QNAITGNTFV SLESNPKVTF NGATGIYGST IPASGYRAEV FKFE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [285-351]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GNSWIQLQNV ATAQNGGVGG INHVGRAKIS AFVTDSRGRQ SPRKEVEISL LEYFKPILSF  60
   61 TSVRVGT

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [352-617]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TMNQLNVIRK VKIAPLIVGN SQKNRATMTW DILDLSTGTK TTNVGGAANW STTTEHTKEN  60
   61 FQATLNGTYD QTKSYTIIGH LRDLFYETDF EFTVGPEKVV YGLSPTGMGI GKAWTRGVLD 120
  121 VDGSQPSYFD GDIIMRNKKL IDIFYPIGTI YESTSSESPS TFMGGKWERF GNGRVLVGVS 180
  181 ETESEFNTVS KTGGSKTHTL TINEMPVHSH PQYVSANSGN QATRRDYSSD GSSSLYPQGN 240
  241 NTGNLEEDRL ITIYNLILQF IGGDVP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 46.39794
Match: 2fl8A
Description: No description for 2fl8A was found.

Predicted Domain #4
Region A:
Residues: [618-760]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LRGETMKQEV LTNKLVFSGI GGVIGSIFGE IDGFLYGLLI FMLIDYVTGI MAAIVEKNLS  60
   61 SSIGKKGIFK KAMIICLVAV AHMIDLHVLK QGGAVRTAVI FFYFSNEGLS ILENATRIGL 120
  121 PVPNRIKQVL RQLNEDKEDE NDK

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 32.431798
Match: PF05105.3
Description: No description for PF05105.3 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
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