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View Structure Prediction Details

Protein: gi|50903100, gi|...
Organism: Streptococcus pyogenes MGAS10394
Length: 303 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|50903100, gi|....

Description E-value Query
Range
Subject
Range
gi|28203058, gi|... - gi|28210620|ref|NP_781564.1| ribokinase [Clostridium tetani E88], gi|28203058|gb|AAO35501.1| ribokin...
235.0 [0..2] [303..5]

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Predicted Domain #1
Region A:
Residues: [1-303]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIYTVTLNPS IDFIVRIDQI NLGSVNRMAS DDKFAGGKGI NVSRILQRLD IASTATGFLG  60
   61 GFTGRFIEES LSAEGVKTDF VKGDQDTRIN VKIKSQEETE INGQGPVISR EQLEDLKTKL 120
  121 SQLTAEDTVV FAGSAPANLG NAVYKELLPL VRQSGAQVVC DFEGQTLIDA LTYNPLLVKP 180
  181 NNHELEAIFG TILTSLDDVE TYARRLLEMG AQNVIISMAG DGALLVTKEA TYFAKPIKGE 240
  241 VKNSVGAGDS MVAGFTGEFM KSQNPIEALK WGVACGTATA FSDDLATIAF IKETYHKVEV 300
  301 EKR

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Detection Method: PSI-BLAST
Confidence: 51.221849
Match: 2abqA
Description: Crystal structure of fructose-1-phosphate kinase from Bacillus halodurans
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 2.11518580948187 bayes_pls_golite062009
carbohydrate kinase activity 1.99025603598964 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 1.69918601153494 bayes_pls_golite062009
transferase activity 1.65599843675995 bayes_pls_golite062009
kinase activity 1.6060752218324 bayes_pls_golite062009
ribokinase activity 0.51718258191684 bayes_pls_golite062009
phosphofructokinase activity 0.14502182066038 bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor 0.143446029424335 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle