YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|50913634, gi\|...
Organism:	Streptococcus pyogenes MGAS10394
Length:	194 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|50913634, gi|....

Description	E-value	Query Range	Subject Range
gi\|94541398, gi\|... - gi\|94987890\|ref\|YP_595991.1\| putative lipase [Streptococcus pyogenes MGAS9429], gi\|94541398\|gb\|ABF31... gi\|94547158, gi\|... - gi\|94993650\|ref\|YP_601748.1\| Putative lipase [Streptococcus pyogenes MGAS10750], gi\|94547158\|gb\|ABF3... gi\|28896549, gi\|... - gi\|28896549\|ref\|NP_802899.1\| hypothetical protein SPs1637 [Streptococcus pyogenes SSI-1], gi\|2881180... gi\|15674472, gi\|... - gi\|15674472\|ref\|NP_268646.1\| hypothetical protein SPy_0305 [Streptococcus pyogenes M1 GAS], gi\|13621... gi\|19747539, gi\|... - gi\|19747539\|gb\|AAL97062.1\| conserved hypothetical protein [Streptococcus pyogenes MGAS8232], gi\|1974... gi\|71902918, gi\|... - gi\|71902918\|ref\|YP_279721.1\| putative lipase [Streptococcus pyogenes MGAS6180], gi\|71802013\|gb\|AAX71... gi\|209558819, gi... - gi\|209558819\|ref\|YP_002285291.1\| hypothetical protein Spy49_0257 [Streptococcus pyogenes NZ131], gi\|... gi\|21903944, gi\|... - gi\|21909759\|ref\|NP_664027.1\| hypothetical protein SpyM3_0223 [Streptococcus pyogenes MGAS315], gi\|21... gi\|71910074, gi\|... - gi\|71910074\|ref\|YP_281624.1\| putative lipase [Streptococcus pyogenes MGAS5005], gi\|71852856\|gb\|AAZ50... gi\|94991775, gi\|... - gi\|94991775\|ref\|YP_599874.1\| putative lipase [Streptococcus pyogenes MGAS2096], gi\|94545283\|gb\|ABF35... gi\|56807735 - gi\|56807735\|ref\|ZP_00365601.1\| COG2179: Predicted hydrolase of the HAD superfamily [Streptococcus py...	165.0	[0..1]	[194..1]

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Predicted Domain #1

Region A:
Residues: [1-194]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLFQKKYDKI ESTNYFGDDM SIDDYRPTYM VEAIYDLRAN DLLRHGITAV LVDLDNTLIA  60
   61 WNNPDGTPEV RAWLDEMTIA DISVVVVSNN KHSRVERAVS RFGVDFISRA LKPFAYGIEK 120
  121 AIARYGFDRN EVIMVGDQLM TDIRASHRAG IKSVLVKPLV ASDAWNTKIN RWREHRVMAK 180
  181 LEEKYGKLSY QKGI

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	22.69897
Match:	2hoqA
Description:	No description for 2hoqA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits