YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|50913512, gi\|...
Organism:	Streptococcus pyogenes MGAS10394
Length:	394 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|50913512, gi|....

Description	E-value	Query Range	Subject Range
gi\|94543138, gi\|... - gi\|94989630\|ref\|YP_597730.1\| Acetyl-CoA acetyltransferase [Streptococcus pyogenes MGAS10270], gi\|945... gi\|94547028, gi\|... - gi\|94993520\|ref\|YP_601618.1\| Acetyl-CoA acetyltransferase [Streptococcus pyogenes MGAS10750], gi\|945... gi\|71902783, gi\|... - gi\|71902783\|ref\|YP_279586.1\| acetyl-CoA acetyltransferase [Streptococcus pyogenes MGAS6180], gi\|7180... gi\|71909933, gi\|... - gi\|71909933\|ref\|YP_281483.1\| acetyl-CoA acetyltransferase [Streptococcus pyogenes MGAS5005], gi\|7185... gi\|13621437, gi\|... - gi\|15674351\|ref\|NP_268525.1\| putative acetyl-CoA acetyltransferase [Streptococcus pyogenes M1 GAS], ...	371.0	[0..1]	[394..1]

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Predicted Domain #1

Region A:
Residues: [1-394]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKEVVITSA YRTPIGNFGG VFKSLSAVDL GVTVVTKILA DTGLKSDAID EVIFGNVLHA  60
   61 GLGQNVARQV ALNAGLSYDT PAFTIDMVCG SGLKAVELGA QKIQTGNADI VLVGGTENMS 120
  121 QAPYVLQGQR WGSRMGDSKV VDTMLKDGLS DAFAGYHMGI TAENIVQQYG LTREEQDAFA 180
  181 ADSQRKAQLA IEKGRFKEEI APVTIPQRKG EPLLIDQDEY PKFGTTVDKL AKLRPAFIKD 240
  241 EGTVTAGNAS GINDGAAAIL LMSKEKAEEL GLPILAKITS YASAGVDPSI MGCGPIPATK 300
  301 KALAKAQLTI DDIDLIEANE AFAAQALAVS RDLGFDNEKV NVNGGAIALG HPIGASGARI 360
  361 LVTLLAEMAK RDVRHGLATL CIGGGQGQSI IVTR

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	84.045757
Match:	1m4sA
Description:	Biosynthetic thiolase
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits