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View Structure Prediction Details

Protein: gi|50843340, gi|...
Organism: Propionibacterium acnes KPA171202
Length: 243 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|50843340, gi|....

Description E-value Query
Range
Subject
Range
RL10_PROAC - 50S ribosomal protein L10 OS=Propionibacterium acnes (strain KPA171202 / DSM 16379) GN=rplJ PE=3 SV=...
RL10_PROAC - 50S ribosomal protein L10 OS=Propionibacterium acnes GN=rplJ PE=3 SV=2
203.0 [0..40] [243..1]

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Predicted Domain #1
Region A:
Residues: [1-243]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIYYPVVRLR TGVSFCPPYG SGASSPAASA TYEKWEGDPM ARPDKVAAVA ELKEKFSSAG  60
   61 ATVLTEYRGL SVSALKDLRR SLGSDATYAV AKNTLTRIAA KEAGIEGLDD QLVGPTALAF 120
  121 INGDVASVAK GLKNFAKDNP LLVIKGGVMD GNVLDADQVK KLADLESREV LLAKLAGGLK 180
  181 ANLTKAAVVF NALPSKAARG LGALQEKAAA DPSVIGGAGE ASDQEPKTTE TPEASAAQDN 240
  241 TNE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 40.522879
Match: 1zavA
Description: Ribosomal Protein L10-L12(NTD) Complex, Space Group P21
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
structural constituent of ribosome 3.24907053933923 bayes_pls_golite062009
structural molecule activity 2.96620336163367 bayes_pls_golite062009

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