YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|49611289, gi\|...
Organism:	Pectobacterium atrosepticum SCRI1043
Length:	183 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|49611289, gi|....

Description	E-value	Query Range	Subject Range
gi\|2982362 - gi\|2982362\|gb\|AAC78466.1\| glutathione peroxidase [Zantedeschia aethiopica]	173.0	[0..3]	[182..85]
gi\|56420320, gi\|... - gi\|56420320\|ref\|YP_147638.1\| glutathione peroxidase [Geobacillus kaustophilus HTA426], gi\|56380162\|d...	172.0	[0..3]	[181..1]
gi\|91688090, gi\|... - gi\|91784136\|ref\|YP_559342.1\| glutathione peroxidase [Burkholderia xenovorans LB400], gi\|91688090\|gb\|...	171.0	[0..3]	[181..2]
gi\|67097789, gi\|... - gi\|67668648\|ref\|ZP_00465734.1\| Glutathione peroxidase [Burkholderia cenocepacia HI2424], gi\|67097789... gi\|74021136, gi\|... - gi\|89899296\|ref\|YP_521767.1\| glutathione peroxidase [Rhodoferax ferrireducens T118], gi\|89344033\|gb\|...	171.0	[0..3]	[182..2]
gi\|124261644, gi... - gi\|124268869\|ref\|YP_001022873.1\| glutathione peroxidase [Methylibium petroleiphilum PM1], gi\|1242616... gi\|47573227 - gi\|47573227\|ref\|ZP_00243266.1\| COG0386: Glutathione peroxidase [Rubrivivax gelatinosus PM1]	170.0	[0..1]	[182..2]
gi\|46319251, gi\|... - gi\|67549094\|ref\|ZP_00426968.1\| Glutathione peroxidase [Burkholderia vietnamiensis G4], gi\|67529600\|g...	170.0	[0..3]	[181..2]
gi\|25285632 - pir\|\|F87463 glutathione peroxidase [imported] - Caulobacter crescentus gi\|13423148, gi\|... - gi\|16125974\|ref\|NP_420538.1\| glutathione peroxidase [Caulobacter crescentus CB15], gi\|13423148\|gb\|AA... gi\|221234741, gi... - gi\|221234741\|ref\|YP_002517177.1\| glutathione peroxidase [Caulobacter crescentus NA1000], gi\|22096391...	169.0	[0..1]	[181..1]
gi\|21245058, gi\|... - gi\|21245058\|ref\|NP_644640.1\| glutathione peroxidase [Xanthomonas axonopodis pv. citri str. 306], gi\|...	168.0	[0..1]	[182..1]
gi\|86739770, gi\|... - gi\|86739770\|ref\|YP_480170.1\| glutathione peroxidase [Frankia sp. CcI3], gi\|86566632\|gb\|ABD10441.1\| G...	168.0	[0..3]	[182..1]

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Predicted Domain #1

Region A:
Residues: [1-183]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTEIYAIPL TTIDGKATTF EAFKGQVALV VNVASKCGLT KQYDALEKLY ETYRDKGLVV  60
   61 LGFPSNEFAG QEPGSEEEIQ EFCRGTFGVQ FPMFSKIEVN GENRHPLYQL LIRQQPEANG 120
  121 TWKSDFFARL VNKGRKPKNP EDILWNFEKF LVDREGRVIE RFAPDMSPDH DTIVKAIEAA 180
  181 LAK

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	35.0
Match:	2p5qA
Description:	No description for 2p5qA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits