YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30264310, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	138 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30264310, gi|....

Description	E-value	Query Range	Subject Range
gi\|227817013, gi... - gi\|227817013\|ref\|YP_002817022.1\| putative comG operon protein 6 [Bacillus anthracis str. CDC 684], g... gi\|254683998 - gi\|254683998\|ref\|ZP_05147858.1\| putative comG operon protein 6 [Bacillus anthracis str. CNEVA-9066] gi\|254721832 - gi\|254721832\|ref\|ZP_05183621.1\| putative comG operon protein 6 [Bacillus anthracis str. A1055] gi\|254736346 - gi\|254736346\|ref\|ZP_05194052.1\| putative comG operon protein 6 [Bacillus anthracis str. Western Nort... gi\|254753981 - gi\|254753981\|ref\|ZP_05206016.1\| putative comG operon protein 6 [Bacillus anthracis str. Vollum] gi\|254757852 - gi\|254757852\|ref\|ZP_05209879.1\| putative comG operon protein 6 [Bacillus anthracis str. Australia 94... gi\|65321618, gi\|... - gi\|65321618\|ref\|ZP_00394577.1\| COG4940: Competence protein ComGF [Bacillus anthracis str. A2012], re...	8.0E-59	[1..138]	[19..156]
gi\|51974727, gi\|... - gi\|52141258\|ref\|YP_085570.1\| comG operon protein 6 [Bacillus cereus E33L], gi\|51974727\|gb\|AAU16277.1...	2.0E-58	[1..138]	[19..156]
gi\|30022318, gi\|... - gi\|30022318\|ref\|NP_833949.1\| ComG operon protein 6 [Bacillus cereus ATCC 14579], gi\|29897875\|gb\|AAP1...	1.0E-56	[1..138]	[30..167]
gi\|75760920, gi\|... - gi\|75760920\|ref\|ZP_00740930.1\| ComG operon protein 6 [Bacillus thuringiensis serovar israelensis ATC...	2.0E-55	[1..138]	[33..170]
gi\|42783362, gi\|... - gi\|42783362\|ref\|NP_980609.1\| comG operon protein 6, putative [Bacillus cereus ATCC 10987], gi\|427392...	4.0E-55	[1..137]	[33..169]
gi\|47555473, gi\|... - gi\|47567796\|ref\|ZP_00238504.1\| ComG operon protein 6 [Bacillus cereus G9241], gi\|47555473\|gb\|EAL1381...	7.0E-53	[1..137]	[1..137]
gi\|89153492, gi\|... - gi\|89208585\|ref\|ZP_01187084.1\| comG operon protein 6, putative [Bacillus weihenstephanensis KBAB4], ...	2.0E-45	[1..136]	[16..151]
gi\|89149606, gi\|... - gi\|89202397\|ref\|ZP_01181122.1\| comG operon protein 6, putative [Bacillus cereus subsp. cytotoxis NVH...	7.0E-36	[1..138]	[33..170]
gi\|89086058, gi\|... - gi\|89099212\|ref\|ZP_01172090.1\| hypothetical protein B14911_08015 [Bacillus sp. NRRL B-14911], gi\|890...	3.0E-5	[5..137]	[16..146]

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Predicted Domain #1

Region A:
Residues: [1-138]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIVCFFLLSL FFVLFPRLHF IGMENKQLKG LNDWEWDVFL GQVQLEFREV SFVEKIVPEN  60
   61 RESMLRFRLR TGDEVTYEKL NNHLIRKVNM RGREVILQNV ERVSYEVTPH LLFINVKDRS 120
  121 GIIYEGVAIR YSEMEINI

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

		MCM Score	SCOP Match	SCOP Description
View	Download	0.650	d.24.1	Pili subunits
View	Download	0.488	d.24.1	Pili subunits
View	Download	0.456	b.1.1	Immunoglobulin
View	Download	0.434	d.110.3	PYP-like sensor domain (PAS domain)
View	Download	0.416	d.21.1	Diaminopimelate epimerase-like

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits