YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30259146, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	350 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30259146, gi|....

Description	E-value	Query Range	Subject Range
gi\|65321784 - gi\|65321784\|ref\|ZP_00394743.1\| COG0809: S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queu...	0.0	[1..350]	[5..354]
QUEA_BACCZ - S-adenosylmethionine:tRNA ribosyltransferase-isomerase OS=Bacillus cereus (strain ZK / E33L) GN=queA...	0.0	[1..350]	[1..350]
QUEA_BACCR - S-adenosylmethionine:tRNA ribosyltransferase-isomerase OS=Bacillus cereus (strain ATCC 14579 / DSM 3... gi\|228653815, gi... - gi\|229129698\|ref\|ZP_04258666.1\| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus cer...	0.0	[1..350]	[1..350]
QUEA_GEOKA - S-adenosylmethionine:tRNA ribosyltransferase-isomerase OS=Geobacillus kaustophilus GN=queA PE=3 SV=1 QUEA_GEOKA - S-adenosylmethionine:tRNA ribosyltransferase-isomerase OS=Geobacillus kaustophilus (strain HTA426) G...	0.0	[1..342]	[1..342]
QUEA_CLOPE - S-adenosylmethionine:tRNA ribosyltransferase-isomerase OS=Clostridium perfringens GN=queA PE=3 SV=1 gi\|182624446, gi... - gi\|182624446\|ref\|ZP_02952230.1\| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium ... QUEA_CLOPE - S-adenosylmethionine:tRNA ribosyltransferase-isomerase OS=Clostridium perfringens (strain 13 / Type ... QUEA_CLOP1 - S-adenosylmethionine:tRNA ribosyltransferase-isomerase OS=Clostridium perfringens (strain ATCC 13124... gi\|168215572, gi... - gi\|182382391\|gb\|EDT79870.1\| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium perf... gi\|168214133, gi... - gi\|170714349\|gb\|EDT26531.1\| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium perf... gi\|170663657, gi... - gi\|170663657\|gb\|EDT16340.1\| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium perf...	0.0	[1..341]	[1..340]
QUEA_CLOPS - S-adenosylmethionine:tRNA ribosyltransferase-isomerase OS=Clostridium perfringens (strain SM101 / Ty...	0.0	[1..341]	[1..340]
gi\|55736605 - gb\|AAV60247.1\| S-adenosylmethionine-tRNA ribosyltransferase-isomerase [Streptococcus thermophilus LM... QUEA_STRT2 - S-adenosylmethionine:tRNA ribosyltransferase-isomerase OS=Streptococcus thermophilus (strain ATCC BA...	0.0	[1..346]	[1..346]
QUEA_STRTD - S-adenosylmethionine:tRNA ribosyltransferase-isomerase OS=Streptococcus thermophilus (strain ATCC BA...	0.0	[1..346]	[1..346]
gi\|229306035, gi... - gi\|229548806\|ref\|ZP_04437531.1\| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Enterococcus... gi\|227175888, gi... - gi\|227554979\|ref\|ZP_03985026.1\| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Enterococcus... gi\|229308173, gi... - gi\|229546713\|ref\|ZP_04435438.1\| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Enterococcus... QUEA_ENTFA - S-adenosylmethionine:tRNA ribosyltransferase-isomerase OS=Enterococcus faecalis (strain ATCC 700802 ... gi\|227072458, gi... - gi\|227520114\|ref\|ZP_03950163.1\| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Enterococcus... QUEA_ENTFA - S-adenosylmethionine:tRNA ribosyltransferase-isomerase OS=Enterococcus faecalis GN=queA PE=3 SV=1	0.0	[3..341]	[4..342]
QUEA_STRA3 - S-adenosylmethionine:tRNA ribosyltransferase-isomerase OS=Streptococcus agalactiae serotype III (str... QUEA_STRA3 - S-adenosylmethionine:tRNA ribosyltransferase-isomerase OS=Streptococcus agalactiae serotype III GN=q... gi\|77160361, gi\|... - gi\|77413595\|ref\|ZP_00789782.1\| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Streptococcus...	0.0	[1..341]	[1..341]

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Predicted Domain #1

Region A:
Residues: [1-350]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDINLFDFHL PEELIAQVPL EERETSRLMV LDRETGDIEH KHFTDILSYL HEGDCLVLNE  60
   61 TKVMPARLHG VKEDTGAHIE VLLLKQEEGD KWETLVKPAK RVKEGTVISF GEGKLKATCT 120
  121 GTADQGGRQL EFSYDGIFYE ILDELGEMPL PPYIKETLED RDRYQTVYAK EIGSAAAPTA 180
  181 GLHFTEELLE KLKQKGVELA FITLHVGLGT FRPVSADTIE EHHMHAEYYH MSEETAALLN 240
  241 RVKENGGRII TVGTTSTRTL ETIATDHDGK LCAASGWTDI FMYPGYEFKA IDGLITNFHL 300
  301 PKSTLIMLVS AFANRDNVLH AYNEAVKEKY RFFSFGDAMF VASHAKMGNK

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	163.0
Match:	1yy3A
Description:	No description for 1yy3A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits