YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30259055, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	185 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30259055, gi|....

Description	E-value	Query Range	Subject Range
gi\|25290264 - pir\|\|F83816 late competence operon required for DNA binding and uptake comEB [imported] - Bacillus h... gi\|15613897, gi\|... - gi\|15613897\|ref\|NP_242200.1\| late competence operon required for DNA binding and uptake [Bacillus ha...	5.0E-49	[1..185]	[1..185]
gi\|52786486, gi\|... - gi\|52786486\|ref\|YP_092315.1\| hypothetical protein BLi02751 [Bacillus licheniformis ATCC 14580], gi\|5... gi\|18266365 - gi\|18266365\|gb\|AAL67525.1\|AF459916_2 late competence protein ComEB [Bacillus licheniformis]	1.0E-47	[1..185]	[1..185]
COMEB_BACSU, CME... - ComE operon protein 2 OS=Bacillus subtilis GN=comEB PE=3 SV=1, (P32393) ComE operon protein 2 gi\|221314807 - gi\|221314807\|ref\|ZP_03596612.1\| required for DNA binding and uptake (competence) [Bacillus subtilis ... gi\|221319729 - gi\|221319729\|ref\|ZP_03601023.1\| required for DNA binding and uptake (competence) [Bacillus subtilis ... COMEB_BACSU - ComE operon protein 2 OS=Bacillus subtilis (strain 168) GN=comEB PE=3 SV=1 gi\|221324007 - gi\|221324007\|ref\|ZP_03605301.1\| required for DNA binding and uptake (competence) [Bacillus subtilis ...	7.0E-46	[1..185]	[1..185]
gi\|22777664, gi\|... - gi\|23099435\|ref\|NP_692901.1\| late competence protein [Oceanobacillus iheyensis HTE831], gi\|22777664\|...	3.0E-45	[1..185]	[1..185]
gi\|51974647, gi\|... - gi\|52141178\|ref\|YP_085651.1\| ComE operon protein 2 [Bacillus cereus E33L], gi\|51974647\|gb\|AAU16197.1...	4.0E-45	[1..185]	[1..185]
gi\|152025508, gi... - gi\|89203490\|ref\|ZP_01182148.1\| Cytidine/deoxycytidylate deaminase, zinc-binding region [Bacillus cer...	4.0E-45	[1..185]	[1..185]
gi\|29897962, gi\|... - gi\|30022404\|ref\|NP_834035.1\| ComE operon protein 2 [Bacillus cereus ATCC 14579], gi\|29897962\|gb\|AAP1...	5.0E-45	[1..182]	[1..182]
gi\|37650595 - gi\|37650595\|emb\|CAD69019.1\| ComEB protein [Bacillus megaterium] gi\|37650595\|emb\|... - ComEB protein [Bacillus megaterium]	9.0E-45	[1..185]	[1..185]
gi\|163864279, gi... - gi\|89206294\|ref\|ZP_01184854.1\| Cytidine/deoxycytidylate deaminase, zinc-binding region [Bacillus wei...	2.0E-44	[1..185]	[1..185]
gi\|89100804, gi\|... - gi\|89100804\|ref\|ZP_01173656.1\| ComEB [Bacillus sp. NRRL B-14911], gi\|89084450\|gb\|EAR63599.1\| ComEB [...	2.0E-41	[3..185]	[4..186]

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Predicted Domain #1

Region A:
Residues: [1-185]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERISWDQYF MTQSHLLSLR STCTRLAVGA TIVRDKRIIA GGYNGSIKGG VHCIDDGCYV  60
   61 IDNHCVRTIH AEMNALLQCA KFGVKTEEAE IYVTHFPCLQ CCKAIIQSGI TAVYYAQDYK 120
  121 NHPYAVELFE KANVTVKHVP LEYDIAALED QKRHMELKEL FASLEKENLS MEELQHVFTK 180
  181 AKMML

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	34.69897
Match:	2hvvA
Description:	No description for 2hvvA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits