YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30265408, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	281 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30265408, gi|....

Description	E-value	Query Range	Subject Range
gi\|218900513, gi... - gi\|218900513\|ref\|YP_002448924.1\| putative lipoate-protein ligase A [Bacillus cereus G9842], gi\|21854... gi\|228903864, gi... - gi\|228903864\|ref\|ZP_04067979.1\| Biotin/lipoate A/B protein ligase [Bacillus thuringiensis IBL 4222],... gi\|228791224, gi... - gi\|228968518\|ref\|ZP_04129506.1\| Biotin/lipoate A/B protein ligase [Bacillus thuringiensis serovar so... gi\|75758552, gi\|... - gi\|75758552\|ref\|ZP_00738672.1\| Lipoate-protein ligase A [Bacillus thuringiensis serovar israelensis ...	1.0E-65	[1..281]	[1..281]
gi\|228635575, gi... - gi\|229147925\|ref\|ZP_04276266.1\| Biotin/lipoate A/B protein ligase [Bacillus cereus BDRD-ST24], gi\|22... gi\|228652972, gi... - gi\|229130633\|ref\|ZP_04259589.1\| Biotin/lipoate A/B protein ligase [Bacillus cereus BDRD-Cer4], gi\|22... LIPL_BACCR - Octanoyl-[GcvH]:protein N-octanoyltransferase OS=Bacillus cereus (strain ATCC 14579 / DSM 31 / JCM 2...	1.0E-65	[1..281]	[1..281]
gi\|51973648, gi\|... - gi\|52140179\|ref\|YP_086653.1\| lipoate-protein ligase A [Bacillus cereus E33L], gi\|51973648\|gb\|AAU1519... gi\|229094498, gi... - gi\|229094498\|ref\|ZP_04225567.1\| Biotin/lipoate A/B protein ligase [Bacillus cereus Rock3-42], gi\|228...	2.0E-65	[1..281]	[1..281]
gi\|42784560, gi\|... - gi\|42784560\|ref\|NP_981807.1\| lipoate-protein ligase A, putative [Bacillus cereus ATCC 10987], gi\|427...	6.0E-65	[1..281]	[1..281]
gi\|47570388, gi\|... - gi\|47570388\|ref\|ZP_00241029.1\| lipoate-protein ligase A family protein [Bacillus cereus G9241], gi\|4...	1.0E-64	[1..281]	[1..281]
gi\|89156157, gi\|... - gi\|89205931\|ref\|ZP_01184496.1\| Biotin/lipoate A/B protein ligase [Bacillus weihenstephanensis KBAB4]... gi\|228746703, gi... - gi\|229014551\|ref\|ZP_04171667.1\| Biotin/lipoate A/B protein ligase [Bacillus mycoides DSM 2048], gi\|2... gi\|229136202, gi... - gi\|229136202\|ref\|ZP_04264953.1\| Biotin/lipoate A/B protein ligase [Bacillus cereus BDRD-ST196], gi\|2...	4.0E-64	[1..281]	[1..281]
gi\|89201473, gi\|... - gi\|89201473\|ref\|ZP_01180213.1\| Biotin/lipoate A/B protein ligase [Bacillus cereus subsp. cytotoxis N...	1.0E-63	[1..281]	[1..281]
gi\|16801772 - gi\|16801772\|ref\|NP_472040.1\| hypothetical protein lin2711 [Listeria innocua Clip11262] gi\|16415247, gi\|... - pir\|\|AI1770 hypothetical protein lin2711 [imported] - Listeria innocua (strain Clip11262), gi\|16415...	2.0E-61	[1..277]	[1..277]

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Predicted Domain #1

Region A:
Residues: [1-281]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNSRSILSQ PEWRIVDQSS LGPTFHALQS FAMDDTLCTS IGKGESAATM RSWVHHNTIV  60
   61 LGIQDSRLPH LEEGISFLKE NNFNVIVRNS GGLAVVLDEG VLNVSLLFQE TEKGIDIDLG 120
  121 YDTMWHLIQE MLKDYDVTIE AKEIVGSYCP GSYDLSIRDQ KFAGISQRRI RGGVAVQIYL 180
  181 CATGSGSERA ALVRDFYNLA IQGEETRFTY PEIVPSTMAS LSELLDETIT VQDLMMRLLK 240
  241 TLQQFAPKLT PSQLTIDEIP LYETNLQRII DRNNKALGLE K

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	58.39794
Match:	2p5iA
Description:	No description for 2p5iA was found.

Predicted functions:

Term	Confidence	Notes
ligase activity, forming carbon-oxygen bonds	3.33073922220594	bayes_pls_golite062009
ligase activity, forming aminoacyl-tRNA and related compounds	3.33073922220594	bayes_pls_golite062009
aminoacyl-tRNA ligase activity	3.33034630936933	bayes_pls_golite062009
ligase activity	3.05852492533937	bayes_pls_golite062009
catalytic activity	2.36416267096403	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: