YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30260111, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	274 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30260111, gi|....

Description	E-value	Query Range	Subject Range
gi\|30023443, gi\|... - gi\|30023443\|ref\|NP_835074.1\| pyridoxal kinase [Bacillus cereus ATCC 14579], gi\|29899004\|gb\|AAP12275.... gi\|229051084, gi... - gi\|229051084\|ref\|ZP_04194631.1\| Phosphomethylpyrimidine kinase [Bacillus cereus AH676], gi\|228722295... gi\|228798026, gi... - gi\|228961676\|ref\|ZP_04123284.1\| Phosphomethylpyrimidine kinase [Bacillus thuringiensis serovar pakis... gi\|229130661, gi... - gi\|229130661\|ref\|ZP_04259617.1\| Phosphomethylpyrimidine kinase [Bacillus cereus BDRD-Cer4], gi\|22865... gi\|229112826, gi... - gi\|229112826\|ref\|ZP_04242358.1\| Phosphomethylpyrimidine kinase [Bacillus cereus Rock1-15], gi\|228670...	5.0E-59	[1..274]	[1..274]
gi\|42740519, gi\|... - gi\|42784587\|ref\|NP_981834.1\| pyridoxal kinase [Bacillus cereus ATCC 10987], gi\|42740519\|gb\|AAS44442....	2.0E-58	[1..274]	[1..274]
gi\|149948927, gi... - gi\|77686688\|ref\|ZP_00802021.1\| Phosphomethylpyrimidine kinase [Alkaliphilus metalliredigenes QYMF], ...	5.0E-58	[3..264]	[1..258]
gi\|51978691, gi\|... - gi\|52145222\|ref\|YP_086679.1\| pyridoxal kinase [Bacillus cereus E33L], gi\|51978691\|gb\|AAU20241.1\| pho...	1.0E-57	[1..273]	[1..273]
gi\|229065064, gi... - gi\|229065064\|ref\|ZP_04200359.1\| Phosphomethylpyrimidine kinase [Bacillus cereus AH603], gi\|228716206... gi\|228613349, gi... - gi\|229170118\|ref\|ZP_04297807.1\| Phosphomethylpyrimidine kinase [Bacillus cereus AH621], gi\|228613349... gi\|229136231, gi... - gi\|229136231\|ref\|ZP_04264980.1\| Phosphomethylpyrimidine kinase [Bacillus cereus BDRD-ST196], gi\|2286... gi\|163943096, gi... - gi\|89205958\|ref\|ZP_01184523.1\| Phosphomethylpyrimidine kinase [Bacillus weihenstephanensis KBAB4], g...	3.0E-57	[1..274]	[1..274]
gi\|106895590, gi... - gi\|158321715\|ref\|YP_001514222.1\| phosphomethylpyrimidine kinase [Alkaliphilus oremlandii OhILAs], gi...	3.0E-57	[3..264]	[1..258]
gi\|228624585, gi... - gi\|229158974\|ref\|ZP_04287031.1\| Phosphomethylpyrimidine kinase [Bacillus cereus ATCC 4342], gi\|22862... gi\|228771092, gi... - gi\|228988641\|ref\|ZP_04148727.1\| Phosphomethylpyrimidine kinase [Bacillus thuringiensis serovar tochi... gi\|47568530, gi\|... - gi\|47568530\|ref\|ZP_00239229.1\| phosphomethylpyrimidine kinase [Bacillus cereus G9241], gi\|47554772\|g...	4.0E-57	[1..274]	[1..274]
gi\|27468610, gi\|... - gi\|27468610\|ref\|NP_765247.1\| phosphomethylpyrimidine kinase [Staphylococcus epidermidis ATCC 12228],... gi\|57638290, gi\|... - gi\|57867632\|ref\|YP_189265.1\| phosphomethylpyrimidine kinase [Staphylococcus epidermidis RP62A], gi\|5...	4.0E-57	[2..267]	[3..267]
gi\|28211403, gi\|... - gi\|28211403\|ref\|NP_782347.1\| hydroxymethylpyrimidine kinase [Clostridium tetani E88], gi\|28203844\|gb...	7.0E-57	[4..263]	[8..278]
gi\|151222209, gi... - gi\|151222209\|ref\|YP_001333031.1\| phosphomethylpyrimidine kinase [Staphylococcus aureus subsp. aureus... gi\|221141613 - gi\|221141613\|ref\|ZP_03566106.1\| phosphomethylpyrimidine kinase [Staphylococcus aureus subsp. aureus ... gi\|87161070, gi\|... - gi\|87161070\|ref\|YP_494695.1\| phosphomethylpyrimidine kinase [Staphylococcus aureus subsp. aureus USA... gi\|221137058 - gi\|221137058\|ref\|ZP_03561869.1\| phosphomethylpyrimidine kinase [Staphylococcus aureus subsp. aureus ... gi\|87127044\|gb\|A... - phosphomethylpyrimidine kinase [Staphylococcus aureus subsp. aureus USA300], phosphomethylpyrimidine... gi\|57650767, gi\|... - gi\|57650767\|ref\|YP_186901.1\| phosphomethylpyrimidine kinase [Staphylococcus aureus subsp. aureus COL... gi\|88195996, gi\|... - gi\|88195996\|ref\|YP_500809.1\| phosphomethylpyrimidine kinase [Staphylococcus aureus subsp. aureus NCT...	3.0E-56	[2..267]	[3..267]

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Predicted Domain #1

Region A:
Residues: [1-274]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLNKALTIA GSDTSGGAGI QADLKTFQEL GVYGMTSLTT IVTMDPHNGW AHNVFPIPAS  60
   61 TLKPQLETTI EGVGVDALKT GMLGSVEIIE MVAETIEKHN FKNVVVDPVM VCKGADEALH 120
  121 PETNDCLRDV LVPKALVVTP NLFEAYQLSG VKINSLEDMK EAAKKIHALG AKYVLIKGGS 180
  181 KLGTETAIDV LYDGETFDLL ESEKIDTTNT HGAGCTYSAA ITAELAKGKS VKEAVKTAKE 240
  241 FITAAIRYSF KINEYVGPTH HGAYRKFVVS KELV

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	52.221849
Match:	2i5bA
Description:	No description for 2i5bA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits