YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30262087, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	109 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30262087, gi|....

Description	E-value	Query Range	Subject Range
gi\|27362498, gi\|... - gi\|27366297\|ref\|NP_761825.1\| methionyl-tRNA synthetase [Vibrio vulnificus CMCP6], gi\|27362498\|gb\|AAO...	5.0E-34	[2..108]	[555..659]
SYM_VIBVU - Methionine--tRNA ligase OS=Vibrio vulnificus (strain CMCP6) GN=metG PE=3 SV=2 SYM_VIBVU - Methionine--tRNA ligase OS=Vibrio vulnificus GN=metG PE=3 SV=2	5.0E-34	[2..108]	[585..689]
SYM_VIBVY - Methionine--tRNA ligase OS=Vibrio vulnificus (strain YJ016) GN=metG PE=3 SV=1	5.0E-34	[2..108]	[585..689]
gi\|90579105, gi\|... - gi\|90579105\|ref\|ZP_01234915.1\| methionyl-tRNA synthetase [Vibrio angustum S14], gi\|90439938\|gb\|EAS65...	8.0E-34	[2..108]	[576..680]
gi\|89073403, gi\|... - gi\|89073403\|ref\|ZP_01159927.1\| methionyl-tRNA synthetase [Photobacterium sp. SKA34], gi\|89050890\|gb\|...	8.0E-34	[2..108]	[576..680]
SYM_PHOPR - Methionine--tRNA ligase OS=Photobacterium profundum GN=metG PE=3 SV=1 SYM_PHOPR - Methionine--tRNA ligase OS=Photobacterium profundum (strain SS9) GN=metG PE=3 SV=1	2.0E-33	[2..108]	[575..679]
gi\|90413229, gi\|... - gi\|90413229\|ref\|ZP_01221224.1\| methionyl-tRNA synthetase [Photobacterium profundum 3TCK], gi\|9032578...	3.0E-33	[2..108]	[575..679]
SYM_METBF - Methionine--tRNA ligase OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=metG PE=3 SV=1	4.0E-33	[1..108]	[603..709]
SYM_PYRKO - Methionyl-tRNA synthetase OS=Pyrococcus kodakaraensis GN=metG PE=3 SV=1 SYM_THEKO - Methionine--tRNA ligase OS=Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) GN=met...	9.0E-33	[2..108]	[637..740]
SYM_PYRFU - Methionyl-tRNA synthetase OS=Pyrococcus furiosus GN=metG PE=3 SV=1 SYM_PYRFU - Methionine--tRNA ligase OS=Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=me...	1.0E-32	[2..108]	[620..723]

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Predicted Domain #1

Region A:
Residues: [1-109]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANFEDFLTL DLRIGTVTHA EEFKEARVPA IKLEIDFGEL GMKQSSAQIT KRYNPEDLIG  60
   61 QQIVAVVNFP PKRVAGFKSE VLVLGGVPEA GDVVLLQPNM ELPNGTKIS

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	24.30103
Match:	2nzhA
Description:	No description for 2nzhA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits