YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30265050, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	390 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30265050, gi|....

Description	E-value	Query Range	Subject Range
gi\|115251727, gi... - gi\|126700290\|ref\|YP_001089187.1\| putative acetyl-CoA acetyltransferase [Clostridium difficile 630], ...	1.0E-98	[1..389]	[1..392]
gi\|90573693, gi\|... - gi\|90573693\|ref\|ZP_01230204.1\| hypothetical protein CdifQ_02002956 [Clostridium difficile QCD-32g58]... gi\|255518068 - gi\|255518068\|ref\|ZP_05385744.1\| putative acetyl-CoA acetyltransferase [Clostridium difficile QCD-97b... gi\|255651184 - gi\|255651184\|ref\|ZP_05398086.1\| putative acetyl-CoA acetyltransferase [Clostridium difficile QCD-37x... gi\|254976268 - gi\|254976268\|ref\|ZP_05272740.1\| putative acetyl-CoA acetyltransferase [Clostridium difficile QCD-66c... gi\|255093654 - gi\|255093654\|ref\|ZP_05323132.1\| putative acetyl-CoA acetyltransferase [Clostridium difficile CIP 107... gi\|255315403 - gi\|255315403\|ref\|ZP_05356986.1\| putative acetyl-CoA acetyltransferase [Clostridium difficile QCD-76w...	2.0E-98	[1..389]	[1..392]
gi\|13622708, gi\|... - gi\|15675510\|ref\|NP_269684.1\| putative acetyl-CoA:acetyltransferase [Streptococcus pyogenes M1 GAS], ... gi\|71853939, gi\|... - gi\|71911157\|ref\|YP_282707.1\| acetyl-CoA acetyltransferase [Streptococcus pyogenes MGAS5005], gi\|7185...	3.0E-97	[1..387]	[1..391]
gi\|77996685, gi\|... - gi\|78044570\|ref\|YP_360188.1\| acetyl-CoA acetyltransferase [Carboxydothermus hydrogenoformans Z-2901]...	4.0E-97	[1..390]	[1..393]
gi\|50914736, gi\|... - gi\|50914736\|ref\|YP_060708.1\| Acetyl-CoA acetyltransferase [Streptococcus pyogenes MGAS10394], gi\|509...	6.0E-97	[1..387]	[1..391]
gi\|94544478, gi\|... - gi\|94990970\|ref\|YP_599070.1\| Acetyl-CoA acetyltransferase [Streptococcus pyogenes MGAS10270], gi\|945... gi\|71904047, gi\|... - gi\|71904047\|ref\|YP_280850.1\| acetyl-CoA acetyltransferase [Streptococcus pyogenes MGAS6180], gi\|7180...	8.0E-97	[1..387]	[1..391]
gi\|28202508, gi\|... - gi\|28210073\|ref\|NP_781017.1\| acetyl-CoA acetyltransferase [Clostridium tetani E88], gi\|28202508\|gb\|A...	1.0E-96	[1..389]	[1..391]
gi\|94542477, gi\|... - gi\|94988969\|ref\|YP_597070.1\| acetyl-CoA acetyltransferase [Streptococcus pyogenes MGAS9429], gi\|9454... gi\|94992862, gi\|... - gi\|94992862\|ref\|YP_600961.1\| Acetyl-CoA acetyltransferase [Streptococcus pyogenes MGAS2096], gi\|9454...	2.0E-96	[1..387]	[1..391]
gi\|50732199 - gi\|50732199\|ref\|XP_418525.1\| PREDICTED: similar to Mitogen-activated protein kinase kinase kinase 3 ...	3.0E-96	[2..388]	[828..1212]

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Predicted Domain #1

Region A:
Residues: [1-390]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MREAVIVAGA RTPIGKAKRG SLKTVRPDDL GALVVKETLK RANYEGPIDD LIFGCAMPEA  60
   61 EQGLNMARNI GGLAGLSYDV PAITINRYCS SGLQSIAYGA ERIMLGHSEA VLSGGAESMS 120
  121 LVPMMGHVVR PNSRLVEAAP EYYMGMGHTA EQVAVKYGIS REEQDAFAVR SHQRAAKALA 180
  181 AGNFADETVS VDVTLRTVGA NNKLQEETIT FAQDEGVRAE TTLDILGKLR PAFNVRGSVT 240
  241 AGNSSQMSDG AASVLLMDRE KAVSDGMKPL AKFRSFAVAG VPPEVMGIGP IAAIPKALKL 300
  301 AGLELSDIGL FELNEAFASQ SIQVIRELGL DEEKVNVNGG AIALGHPLGC TGAKLTLSLI 360
  361 HEMKRRNEQF GIVTMCIGGG MGAAGVFELL

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	86.30103
Match:	2iikA
Description:	No description for 2iikA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits