YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30259725, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	594 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30259725, gi|....

Description	E-value	Query Range	Subject Range
gi\|52140527, gi\|... - gi\|52140527\|ref\|YP_086303.1\| acyl-CoA dehydrogenase [Bacillus cereus E33L], gi\|51973996\|gb\|AAU15546....	0.0	[1..594]	[1..594]
gi\|89151780, gi\|... - gi\|89200168\|ref\|ZP_01178923.1\| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central re...	0.0	[1..594]	[1..594]
gi\|47556361, gi\|... - gi\|47567043\|ref\|ZP_00237760.1\| acyl-CoA dehydrogenase [Bacillus cereus G9241], gi\|47556361\|gb\|EAL146... gi\|42784188, gi\|... - gi\|42784188\|ref\|NP_981435.1\| acyl-CoA dehydrogenase [Bacillus cereus ATCC 10987], gi\|42740119\|gb\|AAS...	0.0	[1..594]	[1..594]
gi\|29898602, gi\|... - gi\|30023042\|ref\|NP_834673.1\| Acyl-CoA dehydrogenase [Bacillus cereus ATCC 14579], gi\|29898602\|gb\|AAP... gi\|228630294, gi... - gi\|229153195\|ref\|ZP_04281374.1\| Acyl-CoA dehydrogenase domain protein [Bacillus cereus m1550], gi\|22... gi\|228653193, gi... - gi\|229130260\|ref\|ZP_04259219.1\| Acyl-CoA dehydrogenase domain protein [Bacillus cereus BDRD-Cer4], g...	0.0	[1..594]	[7..600]
gi\|65316997 - gi\|65316997\|ref\|ZP_00389956.1\| COG1960: Acyl-CoA dehydrogenases [Bacillus anthracis str. A2012] gi\|228936306, gi... - gi\|228936306\|ref\|ZP_04099105.1\| Acyl-CoA dehydrogenase domain protein [Bacillus thuringiensis serova... gi\|228917638, gi... - gi\|228917638\|ref\|ZP_04081180.1\| Acyl-CoA dehydrogenase domain protein [Bacillus thuringiensis serova... gi\|228948734, gi... - gi\|228948734\|ref\|ZP_04111012.1\| Acyl-CoA dehydrogenase domain protein [Bacillus thuringiensis serova...	0.0	[1..594]	[15..608]
gi\|75760335, gi\|... - gi\|75760335\|ref\|ZP_00740383.1\| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar israelensis AT... gi\|228607842, gi... - gi\|229175701\|ref\|ZP_04303209.1\| Acyl-CoA dehydrogenase domain protein [Bacillus cereus MM3], gi\|2286... gi\|228903506, gi... - gi\|228903506\|ref\|ZP_04067630.1\| Acyl-CoA dehydrogenase domain protein [Bacillus thuringiensis IBL 42... gi\|229076384, gi... - gi\|229076384\|ref\|ZP_04209349.1\| Acyl-CoA dehydrogenase domain protein [Bacillus cereus Rock4-18], gi... gi\|228910842, gi... - gi\|228910842\|ref\|ZP_04074651.1\| Acyl-CoA dehydrogenase domain protein [Bacillus thuringiensis IBL 20... gi\|229118476, gi... - gi\|229118476\|ref\|ZP_04247830.1\| Acyl-CoA dehydrogenase domain protein [Bacillus cereus Rock1-3], gi\|... gi\|229099462, gi... - gi\|229099462\|ref\|ZP_04230391.1\| Acyl-CoA dehydrogenase domain protein [Bacillus cereus Rock3-29], gi...	0.0	[1..594]	[7..600]
gi\|171990880, gi... - gi\|68056167\|ref\|ZP_00540299.1\| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central re...	0.0	[1..594]	[1..594]
gi\|229135837, gi... - gi\|229135837\|ref\|ZP_04264606.1\| Acyl-CoA dehydrogenase domain protein [Bacillus cereus BDRD-ST196], ... gi\|89206901, gi\|... - gi\|89206901\|ref\|ZP_01185452.1\| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central re...	0.0	[1..594]	[15..608]
gi\|89084630, gi\|... - gi\|89100684\|ref\|ZP_01173541.1\| acetyl-CoA dehydrogenase [Bacillus sp. NRRL B-14911], gi\|89084630\|gb\|...	0.0	[1..594]	[1..594]
gi\|10176110, gi\|... - gi\|15616048\|ref\|NP_244353.1\| butyryl-CoA dehydrogenase [Bacillus halodurans C-125], gi\|10176110\|dbj\|... gi\|25486715 - pir\|\|F84085 butyryl-CoA dehydrogenase BH3486 [imported] - Bacillus halodurans (strain C-125)	0.0	[1..594]	[1..594]

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Predicted Domain #1

Region A:
Residues: [1-594]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKTVGNAVK GGSFLVDEIT IDQVFTPEDF SSEHKMIAKT TEDFIVNEVL PELEYLEQHE  60
   61 FDRSVRLLKE AGELGLLGAD VPEEYGGIGL DKVSSALIAE KFSRAGGFAI THGAHVGIGS 120
  121 LPIVLFGNEE QKKKYLPLLA TGEKLAAYAL TEPGSGSDAL GAKTTARLNA EGTHYVLNGE 180
  181 KQWITNSAFA DVFIVYAKID GEHFSAFIVE KDYAGVSTSP EEKKMGIKCS STRTLILEDA 240
  241 LVPKENLLGE IGKGHIIAFN ILNIGRYKLG VGTVGSAKRA VEISAQYANQ RQQFKQPIAR 300
  301 FPLIQEKLAN MAAKTYAAES SVYRTVGLFE SRMSTLSEEE VKDGKAVAAS IAEYAIECSL 360
  361 NKVFGSEVLD YTVDEGVQIH GGYGFMAEYE IERMYRDSRI NRIFEGTNEI NRLIVPGTFL 420
  421 RKAMKGELPL LQKAQKLQEE LMMMMPEEVG DEPLALQKYL VNNAKKIGLM VAGLAAQKYG 480
  481 KALDKEQEIL VNIADIVSNL YAMESAVLRT EKAIKTTGLE KNKQKVLYTE VFCQEAFNEI 540
  541 EAHAKETLIA VENGDMLRMM LSSLRKLTRH TPLNVIPKKR EIAAKILEDE RYTV

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	112.0
Match:	2uxwA
Description:	No description for 2uxwA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits