YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30255891, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	197 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30255891, gi|....

Description	E-value	Query Range	Subject Range
gi\|15157388, gi\|... - gi\|15889512\|ref\|NP_355193.1\| adenine phosphoribosyltransferase [Agrobacterium tumefaciens str. C58],... gi\|25286869 - gi\|25286869\|pir\|\|A97628 adenine phosphoribosyltransferase (AF109172) [imported] - Agrobacterium tume...	1.0E-35	[3..180]	[25..197]
APT_YERP3 - Adenine phosphoribosyltransferase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=... APT_YERPY - Adenine phosphoribosyltransferase OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=apt ... APT_YERPB - Adenine phosphoribosyltransferase OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=apt P...	7.0E-35	[1..180]	[12..186]
gi\|149365028, gi... - gi\|149365028\|ref\|ZP_01887063.1\| adenine phosphoribosyltransferase [Yersinia pestis CA88-4125], gi\|14... gi\|89104116, gi\|... - gi\|89104116\|ref\|ZP_01176669.1\| COG0503: Adenine/guanine phosphoribosyltransferases and related PRPP-... APT_YERPP - Adenine phosphoribosyltransferase OS=Yersinia pestis (strain Pestoides F) GN=apt PE=3 SV=1 gi\|21957808, gi\|... - gi\|22124966\|ref\|NP_668389.1\| adenine phosphoribosyltransferase [Yersinia pestis KIM], gi\|21957808\|gb... APT_YERPA - Adenine phosphoribosyltransferase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=apt PE=3 SV=1 APT_YERPN - Adenine phosphoribosyltransferase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=apt PE=3 SV=1 gi\|16123288, gi\|... - gi\|218930156\|ref\|YP_002348031.1\| adenine phosphoribosyltransferase [Yersinia pestis CO92], gi\|161232... gi\|45435513, gi\|... - gi\|45440655\|ref\|NP_992194.1\| adenine phosphoribosyltransferase [Yersinia pestis biovar Microtus str.... APT_YERPG - Adenine phosphoribosyltransferase OS=Yersinia pestis bv. Antiqua (strain Angola) GN=apt PE=3 SV=1 gi\|167051059, gi... - gi\|167398555\|ref\|ZP_02304079.1\| adenine phosphoribosyltransferase [Yersinia pestis biovar Antiqua st... gi\|166205724, gi... - gi\|166212937\|ref\|ZP_02238972.1\| adenine phosphoribosyltransferase [Yersinia pestis biovar Antiqua st... gi\|167057291, gi... - gi\|167423121\|ref\|ZP_02314874.1\| adenine phosphoribosyltransferase [Yersinia pestis biovar Mediaevali... gi\|167422744, gi... - gi\|167422744\|ref\|ZP_02314497.1\| adenine phosphoribosyltransferase [Yersinia pestis biovar Orientalis... APT_YERPE - Adenine phosphoribosyltransferase OS=Yersinia pestis GN=apt PE=3 SV=1 gi\|167470064 - gi\|167470064\|ref\|ZP_02334768.1\| adenine phosphoribosyltransferase [Yersinia pestis FV-1] gi\|165990046, gi... - gi\|166011046\|ref\|ZP_02231944.1\| adenine phosphoribosyltransferase [Yersinia pestis biovar Antiqua st... gi\|165927630, gi... - gi\|165927630\|ref\|ZP_02223462.1\| adenine phosphoribosyltransferase [Yersinia pestis biovar Orientalis... gi\|229838723, gi... - gi\|229838723\|ref\|ZP_04458882.1\| adenine phosphoribosyltransferase [Yersinia pestis biovar Orientalis... gi\|229896120, gi... - gi\|229896120\|ref\|ZP_04511290.1\| adenine phosphoribosyltransferase [Yersinia pestis Pestoides A], gi\|... gi\|229899291, gi... - gi\|229899291\|ref\|ZP_04514434.1\| adenine phosphoribosyltransferase [Yersinia pestis biovar Orientalis...	9.0E-35	[1..180]	[12..186]
APT_YERPS - Adenine phosphoribosyltransferase OS=Yersinia pseudotuberculosis GN=apt PE=3 SV=1 APT_YERPS - Adenine phosphoribosyltransferase OS=Yersinia pseudotuberculosis serotype I (strain IP32953) GN=apt ...	9.0E-35	[1..180]	[12..186]
APT_HAEIN - Adenine phosphoribosyltransferase OS=Haemophilus influenzae GN=apt PE=3 SV=1 APT_HAEIG - Adenine phosphoribosyltransferase OS=Haemophilus influenzae (strain PittGG) GN=apt PE=3 SV=1 gi\|42631865 - gi\|42631865\|ref\|ZP_00157403.1\| COG0503: Adenine/guanine phosphoribosyltransferases and related PRPP-... gi\|145271773, gi... - gi\|145639211\|ref\|ZP_01794818.1\| adenine phosphoribosyltransferase [Haemophilus influenzae PittII], g... APT_HAEI8 - Adenine phosphoribosyltransferase OS=Haemophilus influenzae (strain 86-028NP) GN=apt PE=3 SV=1 gi\|144978790, gi... - gi\|145629287\|ref\|ZP_01785086.1\| adenine phosphoribosyltransferase [Haemophilus influenzae 22.1-21], ... APT_HAEIN - Adenine phosphoribosyltransferase OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / ... gi\|229810356, gi... - gi\|229846867\|ref\|ZP_04466974.1\| adenine phosphoribosyltransferase [Haemophilus influenzae 7P49H1], g...	2.0E-34	[1..180]	[5..179]
APT_RHIL3 - Adenine phosphoribosyltransferase OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=apt PE=3 SV...	2.0E-34	[1..180]	[5..179]
gi\|42629427 - gi\|42629427\|ref\|ZP_00154974.1\| COG0503: Adenine/guanine phosphoribosyltransferases and related PRPP-...	3.0E-34	[1..180]	[5..179]
APT_MANSM - Adenine phosphoribosyltransferase - Mannheimia succiniciproducens (strain MBEL55E)	3.0E-34	[1..180]	[13..187]
APT_SINMW - Adenine phosphoribosyltransferase OS=Sinorhizobium medicae (strain WSM419) GN=apt PE=3 SV=1	4.0E-34	[3..180]	[7..179]

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Predicted Domain #1

Region A:
Residues: [1-197]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVLQEKILN EGKVLSGDVL KVDAFLNHQI DPVLMQEIGK EFAKRFKEEN ITKIVTIESS  60
   61 GIAPAVMAAL ELGVKVIFAR KRKSLTLQDN MYVANVYSFT KQETNEISLS RNHIDESDRV 120
  121 LIIDDFLANG QAALGLMSLV EQAGASIAGI GIVIEKAFQD GGKKLREQGI RVESLAEIAS 180
  181 LDNNAVTFVQ QETAEVK

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	31.522879
Match:	1y0bA
Description:	Crystal Structure of Xanthine Phosphoribosyltransferase from Bacillus subtilis.
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
transferase activity, transferring glycosyl groups	4.2311942024575	bayes_pls_golite062009
hypoxanthine phosphoribosyltransferase activity	4.09335440098877	bayes_pls_golite062009
adenine phosphoribosyltransferase activity	3.54791114034186	bayes_pls_golite062009
transferase activity, transferring pentosyl groups	3.03016109611914	bayes_pls_golite062009
catalytic activity	2.67475805095976	bayes_pls_golite062009
uracil phosphoribosyltransferase activity	2.54772263155456	bayes_pls_golite062009
transferase activity	2.23444207913717	bayes_pls_golite062009
diphosphotransferase activity	1.16607700772697	bayes_pls_golite062009
ribose phosphate diphosphokinase activity	1.15017289944228	bayes_pls_golite062009
amidophosphoribosyltransferase activity	0.57311583581305	bayes_pls_golite062009
xanthine phosphoribosyltransferase activity	0.396756152343601	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: