YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30264936, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	226 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30264936, gi|....

Description	E-value	Query Range	Subject Range
gi\|47566929, gi\|... - gi\|47566929\|ref\|ZP_00237646.1\| MgtC family protein [Bacillus cereus G9241], gi\|47556247\|gb\|EAL14581.... gi\|42784080, gi\|... - gi\|42784080\|ref\|NP_981327.1\| sapB protein [Bacillus cereus ATCC 10987], gi\|42740011\|gb\|AAS43935.1\| s... gi\|221242408, gi... - gi\|222098349\|ref\|YP_002532407.1\| sapB protein [Bacillus cereus Q1], gi\|221242408\|gb\|ACM15118.1\| sapB...	2.0E-55	[1..226]	[1..226]
gi\|229187137, gi... - gi\|229187137\|ref\|ZP_04314283.1\| Membrane protein, MgtC/SapB [Bacillus cereus BGSC 6E1], gi\|228596306... gi\|228835991, gi... - gi\|228923630\|ref\|ZP_04086909.1\| Membrane protein, MgtC/SapB [Bacillus thuringiensis serovar huazhong... gi\|225866870, gi... - gi\|225866870\|ref\|YP_002752248.1\| sapB protein [Bacillus cereus 03BB102], gi\|225789548\|gb\|ACO29765.1\|... gi\|196043830, gi... - gi\|196043830\|ref\|ZP_03111067.1\| sapB protein [Bacillus cereus 03BB108], gi\|196025166\|gb\|EDX63836.1\| ... gi\|196028629, gi... - gi\|196040497\|ref\|ZP_03107797.1\| sapB protein [Bacillus cereus NVH0597-99], gi\|196028629\|gb\|EDX67236.... gi\|51974098, gi\|... - gi\|52140629\|ref\|YP_086200.1\| MgtC/SapB family membrane protein [Bacillus cereus E33L], gi\|51974098\|g...	5.0E-55	[1..226]	[1..226]
gi\|65316886, gi\|... - gi\|65316886\|ref\|ZP_00389845.1\| COG1285: Uncharacterized membrane protein [Bacillus anthracis str. A2...	5.0E-55	[1..226]	[1..226]
gi\|89206129, gi\|... - gi\|89206129\|ref\|ZP_01184692.1\| MgtC/SapB transporter [Bacillus weihenstephanensis KBAB4], gi\|8915603...	1.0E-54	[1..226]	[1..226]
gi\|30022938, gi\|... - gi\|30022938\|ref\|NP_834569.1\| MgtC/SapB family membrane protein [Bacillus cereus ATCC 14579], gi\|2989...	2.0E-54	[1..226]	[1..226]
SAPB_BACSU - Protein SapB OS=Bacillus subtilis (strain 168) GN=sapB PE=1 SV=1 SAPB_BACSU - Protein SapB OS=Bacillus subtilis GN=sapB PE=1 SV=1 gi\|116733915 - gi\|116733915\|gb\|ABK20016.1\| hypothetical protein [synthetic construct]	3.0E-53	[1..226]	[3..232]
gi\|52002371, gi\|... - gi\|52784527\|ref\|YP_090356.1\| hypothetical protein BLi00727 [Bacillus licheniformis ATCC 14580], gi\|5...	2.0E-51	[1..226]	[1..230]
gi\|152977189, gi... - gi\|89200256\|ref\|ZP_01179011.1\| MgtC/SapB transporter [Bacillus cereus subsp. cytotoxis NVH 391-98], ...	9.0E-51	[1..226]	[1..226]
gi\|25319447 - pir\|\|A84053 magnesium (Mg2+) transporter BH3225 [imported] - Bacillus halodurans (strain C-125) gi\|15615787, gi\|... - gi\|15615787\|ref\|NP_244091.1\| magnesium (Mg2+) transporter [Bacillus halodurans C-125], gi\|10175848\|d...	3.0E-49	[4..226]	[2..232]
gi\|118587086, gi... - gi\|118587086\|ref\|ZP_01544516.1\| cation transport ATPase, YqgG-like [Oenococcus oeni ATCC BAA-1163], ... gi\|116490794, gi... - gi\|48865157\|ref\|ZP_00319021.1\| COG1285: Uncharacterized membrane protein [Oenococcus oeni PSU-1], gi...	5.0E-47	[2..222]	[8..224]

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Predicted Domain #1

Region A:
Residues: [1-226]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDYTDLLIKL GLSAILGFAI GLERELKRKP LGLKTCLVIS IISCLLTIVS IKAAYNLPHT  60
   61 DHMNMDPLRL AAQIVSGIGF LGAGVILRRG NDSIAGLTTA AMIWGASGIG IAVGAGFYIE 120
  121 AIFGMCFLMI SVELIPLTMK FVGPRSFRQR DIVVKLVVRK MDNIPVVIEE IKEMDIKVKN 180
  181 MKLKTLENGS HYLHLKLCID QKRHTADVYY SLQHLESVQQ TEVESM

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	56.508638
Match:	PF02308.7
Description:	No description for PF02308.7 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits