YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|49332393, gi\|...
Organism:	Bacillus thuringiensis serovar konkukian str. 97-27
Length:	129 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|49332393, gi|....

Description	E-value	Query Range	Subject Range
gi\|42739029, gi\|... - gi\|42783101\|ref\|NP_980348.1\| competence protein j [Bacillus cereus ATCC 10987], gi\|42739029\|gb\|AAS42...	221.0	[0..1]	[129..1]
gi\|51974955, gi\|... - gi\|52141486\|ref\|YP_085342.1\| competence protein J [Bacillus cereus E33L], gi\|51974955\|gb\|AAU16505.1\|...	220.0	[0..1]	[129..1]
gi\|47565883, gi\|... - gi\|47565883\|ref\|ZP_00236922.1\| competence protein J [Bacillus cereus G9241], gi\|47557163\|gb\|EAL15492...	217.0	[0..1]	[129..1]
gi\|228603027, gi... - gi\|229180280\|ref\|ZP_04307623.1\| hypothetical protein bcere0005_36250 [Bacillus cereus 172560W], gi\|2... gi\|228631166, gi... - gi\|229152204\|ref\|ZP_04280397.1\| hypothetical protein bcere0011_37430 [Bacillus cereus m1550], gi\|228... gi\|228636888, gi... - gi\|229146578\|ref\|ZP_04274947.1\| hypothetical protein bcere0012_37190 [Bacillus cereus BDRD-ST24], gi... gi\|218231642, gi... - gi\|218231642\|ref\|YP_002368806.1\| competence protein j [Bacillus cereus B4264], gi\|218159599\|gb\|ACK59... gi\|229129283, gi... - gi\|229129283\|ref\|ZP_04258255.1\| hypothetical protein bcere0015_37270 [Bacillus cereus BDRD-Cer4], gi... gi\|229192214, gi... - gi\|229192214\|ref\|ZP_04319179.1\| hypothetical protein bcere0002_38670 [Bacillus cereus ATCC 10876], g... gi\|228954280, gi... - gi\|228954280\|ref\|ZP_04116307.1\| hypothetical protein bthur0006_36510 [Bacillus thuringiensis serovar... gi\|30022092, gi\|... - gi\|30022092\|ref\|NP_833723.1\| competence protein J [Bacillus cereus ATCC 14579], gi\|29897649\|gb\|AAP10... gi\|228922756, gi... - gi\|228922756\|ref\|ZP_04086054.1\| hypothetical protein bthur0011_37410 [Bacillus thuringiensis serovar... gi\|228671860, gi... - gi\|229111478\|ref\|ZP_04241029.1\| hypothetical protein bcere0018_37230 [Bacillus cereus Rock1-15], gi\|... gi\|229081259, gi... - gi\|229081259\|ref\|ZP_04213763.1\| hypothetical protein bcere0023_38940 [Bacillus cereus Rock4-2], gi\|2... gi\|228711593, gi... - gi\|229071506\|ref\|ZP_04204725.1\| hypothetical protein bcere0025_36760 [Bacillus cereus F65185], gi\|22... gi\|228960269, gi... - gi\|228960269\|ref\|ZP_04121924.1\| hypothetical protein bthur0005_37380 [Bacillus thuringiensis serovar...	217.0	[0..1]	[129..1]
gi\|218542973, gi... - gi\|218899162\|ref\|YP_002447573.1\| competence protein j [Bacillus cereus G9842], gi\|218542973\|gb\|ACK95... gi\|74491611, gi\|... - gi\|75760907\|ref\|ZP_00740918.1\| Competence protein J [Bacillus thuringiensis serovar israelensis ATCC... gi\|228792655, gi... - gi\|228967031\|ref\|ZP_04128068.1\| hypothetical protein bthur0004_38350 [Bacillus thuringiensis serovar... gi\|228857102, gi... - gi\|228902512\|ref\|ZP_04066664.1\| hypothetical protein bthur0014_36870 [Bacillus thuringiensis IBL 422...	213.0	[0..1]	[129..1]
gi\|163863942, gi... - gi\|89208850\|ref\|ZP_01187333.1\| competence protein J [Bacillus weihenstephanensis KBAB4], gi\|89153227...	186.0	[0..1]	[129..1]
gi\|221317413 - gi\|221317413\|ref\|ZP_03598707.1\| inhibition of the DNA degrading activity of NucA (competence) [Bacil... gi\|221312480 - gi\|221312480\|ref\|ZP_03594285.1\| inhibition of the DNA degrading activity of NucA (competence) [Bacil... NIN_BACSU - DNA-entry nuclease inhibitor OS=Bacillus subtilis GN=nin PE=4 SV=1 NIN_BACSU - DNA-entry nuclease inhibitor OS=Bacillus subtilis (strain 168) GN=nin PE=1 SV=1 gi\|221321676 - gi\|221321676\|ref\|ZP_03602970.1\| inhibition of the DNA degrading activity of NucA (competence) [Bacil...	183.0	[0..2]	[109..9]
gi\|42820788 - emb\|CAE02624.1\| Nin [Bacillus amyloliquefaciens] gi\|154684829, gi... - gi\|42820788\|emb\|CAE02624.1\| Nin [Bacillus amyloliquefaciens FZB42], gi\|154684829\|ref\|YP_001419990.1\|...	178.0	[0..2]	[109..9]
gi\|89202283, gi\|... - gi\|89202283\|ref\|ZP_01181010.1\| competence protein J [Bacillus cereus subsp. cytotoxis NVH 391-98], g...	158.0	[0..1]	[129..1]
gi\|52002050, gi\|... - gi\|52078839\|ref\|YP_077630.1\| hypothetical protein BL01819 [Bacillus licheniformis ATCC 14580], gi\|52...	131.0	[0..2]	[106..9]

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Predicted Domain #1

Region A:
Residues: [1-129]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELTISYSQL MLMNYDGEQP YVDWTDEDFE RGYAKADGTV IFEALSDYTC EVKVTPGKHI  60
   61 EKEEVVRTVA VPFTVENECI VVTSILSNKF QIPIPNGEYT VVLQATPLEE PTDDELYKIQ 120
  121 YEFFFESKE

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

		MCM Score	SCOP Match	SCOP Description
View	Download	0.577	d.21.1	Diaminopimelate epimerase-like
View	Download	0.567	d.107.1	Ran-binding protein mog1p
View	Download	0.461	d.21.1	Diaminopimelate epimerase-like
View	Download	0.394	b.1.2	Fibronectin type III
View	Download	0.351	b.29.1	Concanavalin A-like lectins/glucanases
View	Download	0.346	b.1.2	Fibronectin type III
View	Download	0.296	c.91.1	PEP carboxykinase-like
View	Download	0.267	b.61.4	Quinohemoprotein amine dehydrogenase A chain, domain 3
View	Download	0.235	c.51.2	TolB, N-terminal domain

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits