YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30260590, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	260 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30260590, gi|....

Description	E-value	Query Range	Subject Range
gi\|4584141, gi\|4... - gi\|4584141\|emb\|CAB40600.1\| polysaccharide deacetylase-like protein [Bacillus cereus ATCC 10987], gi\|...	9.0E-67	[1..260]	[1..260]
gi\|52144826, gi\|... - gi\|52144826\|ref\|YP_082007.1\| polysaccharide deacetylase [Bacillus cereus E33L], gi\|51978295\|gb\|AAU19... gi\|196045247, gi... - gi\|196045247\|ref\|ZP_03112479.1\| delta-lactam-biosynthetic de-N-acetylase [Bacillus cereus 03BB108], ... gi\|196040130, gi... - gi\|196040130\|ref\|ZP_03107432.1\| delta-lactam-biosynthetic de-N-acetylase [Bacillus cereus NVH0597-99...	9.0E-67	[1..260]	[1..260]
gi\|74492437, gi\|... - gi\|75760087\|ref\|ZP_00740150.1\| Spore coat N-acetylmuramic acid deacetylase [Bacillus thuringiensis s...	1.0E-66	[1..260]	[7..266]
gi\|229154189, gi... - gi\|229154189\|ref\|ZP_04282312.1\| hypothetical protein bcere0010_3910 [Bacillus cereus ATCC 4342], gi\|... gi\|228776034, gi... - gi\|228983682\|ref\|ZP_04143882.1\| hypothetical protein bthur0001_4020 [Bacillus thuringiensis serovar ... gi\|47556093, gi\|... - gi\|47567250\|ref\|ZP_00237964.1\| polysaccharide deacetylase family protein [Bacillus cereus G9241], gi...	1.0E-66	[1..260]	[1..260]
gi\|229188689, gi... - gi\|229188689\|ref\|ZP_04315728.1\| hypothetical protein bcere0002_3840 [Bacillus cereus ATCC 10876], gi... gi\|228606484, gi... - gi\|229177009\|ref\|ZP_04304404.1\| hypothetical protein bcere0005_3890 [Bacillus cereus 172560W], gi\|22... gi\|228782489, gi... - gi\|228977180\|ref\|ZP_04137579.1\| hypothetical protein bthur0002_3970 [Bacillus thuringiensis Bt407], ... gi\|228802744, gi... - gi\|228956901\|ref\|ZP_04118682.1\| hypothetical protein bthur0005_4390 [Bacillus thuringiensis serovar ... gi\|228808703, gi... - gi\|228950976\|ref\|ZP_04113097.1\| hypothetical protein bthur0006_4070 [Bacillus thuringiensis serovar ... gi\|229143210, gi... - gi\|229143210\|ref\|ZP_04271642.1\| hypothetical protein bcere0012_3830 [Bacillus cereus BDRD-ST24], gi\|... gi\|73915421 - gi\|73915421\|gb\|AAZ92577.1\| PdaA [Bacillus thuringiensis] gi\|228675365, gi... - gi\|229108090\|ref\|ZP_04237715.1\| hypothetical protein bcere0018_3820 [Bacillus cereus Rock1-15], gi\|2... gi\|218231287, gi... - gi\|218231287\|ref\|YP_002365267.1\| delta-lactam-biosynthetic de-N-acetylase [Bacillus cereus B4264], g... gi\|229077779, gi... - gi\|229077779\|ref\|ZP_04210406.1\| hypothetical protein bcere0023_4800 [Bacillus cereus Rock4-2], gi\|22... gi\|206737226, gi... - gi\|206968306\|ref\|ZP_03229262.1\| delta-lactam-biosynthetic de-N-acetylase [Bacillus cereus AH1134], g... gi\|229068172, gi... - gi\|229068172\|ref\|ZP_04201479.1\| hypothetical protein bcere0025_3880 [Bacillus cereus F65185], gi\|228...	2.0E-66	[1..260]	[1..260]
gi\|30018675, gi\|... - gi\|30018675\|ref\|NP_830306.1\| spore coat N-acetylmuramic acid deacetylase [Bacillus cereus ATCC 14579...	5.0E-66	[1..260]	[1..260]
gi\|89157305, gi\|... - gi\|89204678\|ref\|ZP_01183254.1\| Polysaccharide deacetylase [Bacillus weihenstephanensis KBAB4], gi\|89... gi\|228652005, gi... - gi\|229131421\|ref\|ZP_04260317.1\| hypothetical protein bcere0014_3900 [Bacillus cereus BDRD-ST196], gi...	3.0E-65	[1..260]	[1..260]
gi\|152022996, gi... - gi\|89199952\|ref\|ZP_01178708.1\| Polysaccharide deacetylase [Bacillus cereus subsp. cytotoxis NVH 391-...	1.0E-61	[1..260]	[1..260]
gi\|52347128, gi\|... - gi\|52784626\|ref\|YP_090455.1\| YfjS [Bacillus licheniformis ATCC 14580], gi\|52347128\|gb\|AAU39762.1\| Yf...	4.0E-58	[1..255]	[2..254]

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Predicted Domain #1

Region A:
Residues: [1-260]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKHKWLYIGL IFSIMMALVP VSALAYTNTP HNWGIPRPKN ETVPDAGKLY TDLLQKNGGF  60
   61 YLGDTKKKDI YLTFDNGYEN GYTGKILDVL KEKKVPATFF VTGHYIKTQK DLLLRMKDEG 120
  121 HIIGNHSWSH PDFTAVNDEK LREELTSVTE EIKKVTGQKE VKYVRPPRGV FSERTLALTK 180
  181 EMGYYNVFWS LAFLDWKVDE QRGWQYAHNN VMTMIHPGSI LLLHAISKDN AEALAKIIDD 240
  241 LREKGYHFKS LDDLVKSNQP

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	60.221849
Match:	2j13A
Description:	No description for 2j13A was found.

Predicted functions:

Term	Confidence	Notes
catalytic activity	1.54926008475976	bayes_pls_golite062009
deacetylase activity	1.07373873416936	bayes_pls_golite062009
hydrolase activity, hydrolyzing O-glycosyl compounds	1.04159714419468	bayes_pls_golite062009
hydrolase activity, acting on glycosyl bonds	0.78725677170464	bayes_pls_golite062009
hydrolase activity	0.7139390771237	bayes_pls_golite062009
mannosidase activity	0.32530435999467	bayes_pls_golite062009
binding	0.097268039040833	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: