YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30255438, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	202 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30255438, gi|....

Description	E-value	Query Range	Subject Range
gi\|52143858, gi\|... - gi\|52143858\|ref\|YP_082970.1\| adaptor protein [Bacillus cereus E33L], gi\|51977327\|gb\|AAU18877.1\| cons...	1.0E-68	[1..202]	[1..202]
gi\|218233838, gi... - gi\|218233838\|ref\|YP_002366270.1\| putative negative regulator of competence MecA [Bacillus cereus B42... gi\|228807691, gi... - gi\|228951966\|ref\|ZP_04114063.1\| Adapter protein mecA 2 [Bacillus thuringiensis serovar kurstaki str.... gi\|206970866, gi... - gi\|206970866\|ref\|ZP_03231818.1\| putative negative regulator of competence MecA [Bacillus cereus AH11... gi\|228801781, gi... - gi\|228957865\|ref\|ZP_04119605.1\| Adapter protein mecA 2 [Bacillus thuringiensis serovar pakistani str... gi\|228920299, gi... - gi\|228920299\|ref\|ZP_04083646.1\| Adapter protein mecA 2 [Bacillus thuringiensis serovar huazhongensis... gi\|229078771, gi... - gi\|229078771\|ref\|ZP_04211324.1\| Adapter protein mecA 2 [Bacillus cereus Rock4-2], gi\|228704453\|gb\|EE... gi\|229109044, gi... - gi\|229109044\|ref\|ZP_04238644.1\| Adapter protein mecA 2 [Bacillus cereus Rock1-15], gi\|228674322\|gb\|E... gi\|229043333, gi... - gi\|229043333\|ref\|ZP_04191052.1\| Adapter protein mecA 2 [Bacillus cereus AH676], gi\|228726012\|gb\|EEL7... gi\|229069142, gi... - gi\|229069142\|ref\|ZP_04202433.1\| Adapter protein mecA 2 [Bacillus cereus F65185], gi\|228713894\|gb\|EEL... gi\|228633651, gi... - gi\|229149787\|ref\|ZP_04278016.1\| Adapter protein mecA 2 [Bacillus cereus m1550], gi\|228633651\|gb\|EEK9... gi\|228605484, gi... - gi\|229177996\|ref\|ZP_04305368.1\| Adapter protein mecA 2 [Bacillus cereus 172560W], gi\|228605484\|gb\|EE... MECA2_BACCR - Adapter protein MecA 2 OS=Bacillus cereus (strain ATCC 14579 / DSM 31 / JCM 2152 / NBRC 15305 / NCIM... gi\|228656503, gi... - gi\|229126903\|ref\|ZP_04255914.1\| Adapter protein mecA 2 [Bacillus cereus BDRD-Cer4], gi\|228656503\|gb\|... gi\|229144188, gi... - gi\|229144188\|ref\|ZP_04272602.1\| Adapter protein mecA 2 [Bacillus cereus BDRD-ST24], gi\|228639196\|gb\|... gi\|229189671, gi... - gi\|229189671\|ref\|ZP_04316685.1\| Adapter protein mecA 2 [Bacillus cereus ATCC 10876], gi\|228593720\|gb...	1.0E-67	[1..202]	[1..202]
gi\|74489341, gi\|... - gi\|75763174\|ref\|ZP_00742942.1\| Negative regulator of genetic competence mecA [Bacillus thuringiensis... gi\|218543627, gi... - gi\|218896518\|ref\|YP_002444929.1\| putative negative regulator of competence MecA [Bacillus cereus G98... gi\|228900169, gi... - gi\|228900169\|ref\|ZP_04064401.1\| Adapter protein mecA 2 [Bacillus thuringiensis IBL 4222], gi\|2288594... gi\|228964564, gi... - gi\|228964564\|ref\|ZP_04125673.1\| Adapter protein mecA 2 [Bacillus thuringiensis serovar sotto str. T0... gi\|228852441, gi... - gi\|228907220\|ref\|ZP_04071081.1\| Adapter protein mecA 2 [Bacillus thuringiensis IBL 200], gi\|22885244...	7.0E-67	[1..202]	[1..202]
MECA1_BACHD, MEA... - Adapter protein mecA 1 OS=Bacillus halodurans GN=mecA1 PE=3 SV=1, (Q9KCF1) Adapter protein mecA 1 MECA1_BACHD - Adapter protein MecA 1 OS=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 915...	2.0E-59	[1..197]	[1..198]
MEA2_BACSU, MECA... - Adapter protein mecA 2 OS=Bacillus subtilis GN=mecB PE=1 SV=1, (P50734) Adapter protein mecA 2 gi\|221323736 - gi\|221323736\|ref\|ZP_03605030.1\| adaptor protein [Bacillus subtilis subsp. subtilis str. SMY] gi\|221314538 - gi\|221314538\|ref\|ZP_03596343.1\| adaptor protein [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi\|221319460 - gi\|221319460\|ref\|ZP_03600754.1\| adaptor protein [Bacillus subtilis subsp. subtilis str. JH642] MECA2_BACSU - Adapter protein MecA 2 OS=Bacillus subtilis (strain 168) GN=mecB PE=1 SV=1	4.0E-59	[1..195]	[1..193]
gi\|52786178, gi\|... - gi\|52786178\|ref\|YP_092007.1\| adaptor protein [Bacillus licheniformis ATCC 14580], gi\|52348680\|gb\|AAU...	9.0E-56	[1..195]	[1..193]
gi\|220708859, gi... - gi\|221087209\|ref\|ZP_03556748.1\| Negative regulator of genetic competence [Geobacillus sp. Y412MC61],... gi\|229331535, gi... - gi\|229497657\|ref\|ZP_04391357.1\| Negative regulator of genetic competence [Geobacillus sp. Y412MC52],... gi\|56420771, gi\|... - gi\|56420771\|ref\|YP_148089.1\| adaptor protein [Geobacillus kaustophilus HTA426], gi\|56380613\|dbj\|BAD7...	2.0E-53	[1..195]	[1..193]
gi\|47019870, gi\|... - gi\|47091859\|ref\|ZP_00229654.1\| negative regulator of competence MecA [Listeria monocytogenes str. 4b... gi\|254825246 - gi\|254825246\|ref\|ZP_05230247.1\| adaptor protein [Listeria monocytogenes FSL J1-194] MECA_LISMC - Adapter protein mecA OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=mecA PE=3 SV=1 gi\|254878194 - gi\|254878194\|ref\|ZP_05250904.1\| adaptor protein [Listeria monocytogenes FSL J2-071] gi\|254853315 - gi\|254853315\|ref\|ZP_05242663.1\| adaptor protein [Listeria monocytogenes FSL R2-503] gi\|255520806 - gi\|255520806\|ref\|ZP_05388043.1\| adaptor protein [Listeria monocytogenes FSL J1-175] gi\|254993090 - gi\|254993090\|ref\|ZP_05275280.1\| adaptor protein [Listeria monocytogenes FSL J2-064] MECA_LISMF - Adapter protein MecA OS=Listeria monocytogenes serotype 4b (strain F2365) GN=mecA PE=3 SV=1 gi\|153168083, gi... - gi\|153168083\|ref\|ZP_01928114.1\| negative regulator of competence MecA [Listeria monocytogenes FSL N1... gi\|153203290, gi... - gi\|254931697\|ref\|ZP_05265056.1\| adaptor protein [Listeria monocytogenes HPB2262], gi\|153203290\|ref\|Z... MECA_LISMC - Adapter protein MecA OS=Listeria monocytogenes serotype 4b (strain CLIP80459) GN=mecA PE=3 SV=1	8.0E-51	[1..195]	[1..217]
MECA_OCEIH - Adapter protein mecA OS=Oceanobacillus iheyensis GN=mecA PE=3 SV=1 MECA_OCEIH - Adapter protein MecA OS=Oceanobacillus iheyensis (strain DSM 14371 / JCM 11309 / KCTC 3954 / HTE831)...	8.0E-51	[1..195]	[1..191]

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Predicted Domain #1

Region A:
Residues: [1-202]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLERLNYNK IKIFLTFDDL SERGLTKEDL WRNAPKVQQL FRDMMQEANK ELGFEADGPI  60
   61 AVEVFSLQAQ GMVVIVTKEH QEADTDDEFR DEFIEMQVTL DESEHILYEF ATLDDVINLS 120
  121 NRLYNLDVTG GKLYTWDGRF YLWMEEEEQI QLLKADFIAI LAEYGNPSTA TIYRLMEYGK 180
  181 ELMASQAIEQ IHNYFVKKQN LS

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	74.69897
Match:	PF05389.3
Description:	No description for PF05389.3 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits