YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30264004, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	150 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30264004, gi|....

Description	E-value	Query Range	Subject Range
gi\|156721577, gi... - gi\|156979442\|ref\|YP_001441701.1\| putative vacuolating cytotoxin paralog [Staphylococcus aureus subsp... gi\|160368106, gi... - gi\|161509297\|ref\|YP_001574956.1\| hypothetical protein USA300HOU_1058 [Staphylococcus aureus subsp. a... gi\|57634626, gi\|... - gi\|57634626\|ref\|NP_371643.2\| hypothetical protein SAV1119 [Staphylococcus aureus subsp. aureus Mu50]... gi\|90584334, gi\|... - gi\|90584334\|ref\|ZP_01240070.1\| Protein of unknown function DUF1333 [Staphylococcus aureus subsp. aur... gi\|90587119, gi\|... - gi\|90587119\|ref\|ZP_01242793.1\| Protein of unknown function DUF1333 [Staphylococcus aureus subsp. aur... gi\|269202732\|ref... - hypothetical protein SAAV_1086 [Staphylococcus aureus subsp. aureus ED98] gi\|87126119\|gb\|A... - conserved hypothetical protein [Staphylococcus aureus subsp. aureus USA300], hypothetical protein SA... gi\|15926704, gi\|... - gi\|15926704\|ref\|NP_374237.1\| hypothetical protein SA0968 [Staphylococcus aureus subsp. aureus N315],... gi\|227244934, gi... - gi\|227558670\|ref\|ZP_03988717.1\| protein of hypothetical function DUF1333 [Staphylococcus aureus subs... gi\|49241411, gi\|... - gi\|49483282\|ref\|YP_040506.1\| hypothetical protein SAR1093 [Staphylococcus aureus subsp. aureus MRSA2... gi\|227851285, gi... - gi\|227900458\|ref\|ZP_04018263.1\| protein of hypothetical function DUF1333 [Staphylococcus aureus subs... gi\|49244400, gi\|... - gi\|49485957\|ref\|YP_043178.1\| hypothetical protein SAS1054 [Staphylococcus aureus subsp. aureus MSSA4... gi\|251814021, gi... - gi\|251814021\|ref\|ZP_04828494.1\| protein of hypothetical function DUF1333 [Staphylococcus aureus subs... gi\|25359776 - pir\|\|D89882 conserved hypothetical protein SA0968 [imported] - Staphylococcus aureus (strain N315) gi\|253316750 - gi\|253316750\|ref\|ZP_04839963.1\| hypothetical protein SauraC_11515 [Staphylococcus aureus subsp. aure... gi\|21204169, gi\|... - gi\|21282731\|ref\|NP_645819.1\| hypothetical protein MW1002 [Staphylococcus aureus subsp. aureus MW2], ... gi\|253724544, gi... - gi\|253731730\|ref\|ZP_04865895.1\| protein of hypothetical function DUF1333 [Staphylococcus aureus subs... gi\|221138686 - gi\|221138686\|ref\|ZP_03563488.1\| hypothetical protein SauraJK_08600 [Staphylococcus aureus subsp. aur... gi\|253733646, gi... - gi\|253733646\|ref\|ZP_04867811.1\| protein of hypothetical function DUF1333 [Staphylococcus aureus subs... gi\|221140481 - gi\|221140481\|ref\|ZP_03564974.1\| hypothetical protein SauraJ_02461 [Staphylococcus aureus subsp. aure... gi\|255005906 - gi\|255005906\|ref\|ZP_05144507.2\| hypothetical protein SauraM_05535 [Staphylococcus aureus subsp. aure... gi\|57285915, gi\|... - gi\|57651729\|ref\|YP_185993.1\| hypothetical protein SACOL1129 [Staphylococcus aureus subsp. aureus COL... gi\|87202377, gi\|... - gi\|88194819\|ref\|YP_499616.1\| hypothetical protein SAOUHSC_01070 [Staphylococcus aureus subsp. aureus... gi\|87126119, gi\|... - gi\|87160145\|ref\|YP_493717.1\| hypothetical protein SAUSA300_1019 [Staphylococcus aureus subsp. aureus...	162.0	[0..3]	[146..1]
gi\|251810573, gi... - gi\|251810573\|ref\|ZP_04825046.1\| YlbF like protein [Staphylococcus epidermidis BCM-HMP0060], gi\|25180... gi\|57866615, gi\|... - gi\|57866615\|ref\|YP_188292.1\| hypothetical protein SERP0709 [Staphylococcus epidermidis RP62A], gi\|57...	160.0	[0..3]	[146..1]
gi\|27467736, gi\|... - gi\|27467736\|ref\|NP_764373.1\| hypothetical protein SE0818 [Staphylococcus epidermidis ATCC 12228], gi...	160.0	[0..3]	[146..1]
gi\|82750727, gi\|... - gi\|82750727\|ref\|YP_416468.1\| hypothetical protein SAB0984 [Staphylococcus aureus RF122], gi\|82656258...	160.0	[0..3]	[146..1]
gi\|74490249, gi\|... - gi\|75762266\|ref\|ZP_00742153.1\| Hypothetical cytosolic protein [Bacillus thuringiensis serovar israel...	155.0	[0..1]	[131..12]
gi\|172057987, gi... - gi\|68055484\|ref\|ZP_00539629.1\| Protein of unknown function DUF1333 [Exiguobacterium sibiricum 255-15...	154.0	[0..2]	[146..1]
gi\|228987077, gi... - gi\|228987077\|ref\|ZP_04147202.1\| ComK regulator [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1... gi\|206976704, gi... - gi\|206976704\|ref\|ZP_03237608.1\| ComK regulator [Bacillus cereus H3081.97], gi\|206745014\|gb\|EDZ56417.... gi\|229157511, gi... - gi\|229157511\|ref\|ZP_04285588.1\| ComK regulator [Bacillus cereus ATCC 4342], gi\|228625961\|gb\|EEK82711... gi\|229140660, gi... - gi\|229140660\|ref\|ZP_04269209.1\| ComK regulator [Bacillus cereus BDRD-ST26], gi\|228642798\|gb\|EEK99080... gi\|229198047, gi... - gi\|229198047\|ref\|ZP_04324759.1\| ComK regulator [Bacillus cereus m1293], gi\|228585405\|gb\|EEK43511.1\| ... gi\|217961416, gi... - gi\|217961416\|ref\|YP_002339984.1\| ComK regulator [Bacillus cereus AH187], gi\|217065959\|gb\|ACJ80209.1\|... gi\|222097381, gi... - gi\|222097381\|ref\|YP_002531438.1\| ComK regulator [Bacillus cereus Q1], gi\|221241439\|gb\|ACM14149.1\| Co... gi\|47557088, gi\|... - gi\|47565808\|ref\|ZP_00236847.1\| conserved hypothetical protein protein [Bacillus cereus G9241], gi\|47... gi\|42738955, gi\|... - gi\|42783028\|ref\|NP_980275.1\| ComK regulator [Bacillus cereus ATCC 10987], gi\|42738955\|gb\|AAS42883.1\|...	154.0	[0..1]	[131..1]
gi\|29897577, gi\|... - gi\|30022021\|ref\|NP_833652.1\| hypothetical protein BC3933 [Bacillus cereus ATCC 14579], gi\|29897577\|g...	152.0	[0..1]	[131..4]
gi\|52141557, gi\|... - gi\|52141557\|ref\|YP_085274.1\| hypothetical protein BCZK3693 [Bacillus cereus E33L], gi\|51975026\|gb\|AA...	152.0	[0..1]	[131..1]
gi\|65321328 - gi\|65321328\|ref\|ZP_00394287.1\| COG3679: Uncharacterized conserved protein [Bacillus anthracis str. A...	152.0	[0..1]	[131..12]

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Predicted Domain #1

Region A:
Residues: [1-150]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIVATLESVL ILDKAEQLAK AIICSDIAED YRKCYKELQE DMEVQTLIQQ FTAMKERYEE  60
   61 VQRFGKYHPD YTFVSTKMRE LKRSVDLHDK IAAFKRVETA LQKLLDEVSV AIGSEVSSSI 120
  121 KVPTGNPFFD AGGCGGGCGT GGGCGCKKTG

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	26.0
Match:	2pihA
Description:	No description for 2pihA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits