YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30258188, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	139 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30258188, gi|....

Description	E-value	Query Range	Subject Range
gi\|75830162, gi\|... - gi\|75830162\|ref\|ZP_00759445.1\| COG0824: Predicted thioesterase [Vibrio cholerae MO10], gi\|254848926\|... gi\|121727648, gi... - gi\|75814779\|ref\|ZP_00745330.1\| COG0824: Predicted thioesterase [Vibrio cholerae V52], gi\|121727648\|r... gi\|227081969, gi... - gi\|227081969\|ref\|YP_002810520.1\| hypothetical protein VCM66_1763 [Vibrio cholerae M66-2], gi\|2270098... gi\|229511698, gi... - gi\|229511698\|ref\|ZP_04401177.1\| 4-hydroxybenzoyl-CoA thioesterase family active site protein [Vibrio... gi\|11354652 - pir\|\|D82152 conserved hypothetical protein VC1840 [imported] - Vibrio cholerae (strain N16961 serogr... gi\|153828556, gi... - gi\|153828556\|ref\|ZP_01981223.1\| conserved hypothetical protein [Vibrio cholerae 623-39], gi\|14887595... gi\|153827557, gi... - gi\|153827557\|ref\|ZP_01980224.1\| conserved hypothetical protein [Vibrio cholerae MZO-2], gi\|149738470... gi\|121591343, gi... - gi\|121591343\|ref\|ZP_01678631.1\| conserved hypothetical protein [Vibrio cholerae 2740-80], gi\|1215468... gi\|9656367, gi\|1... - gi\|9656367\|gb\|AAF94988.1\| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor str. N169... gi\|153820330, gi... - gi\|153820330\|ref\|ZP_01972997.1\| conserved hypothetical protein [Vibrio cholerae NCTC 8457], gi\|12650...	4.0E-31	[1..126]	[21..146]
gi\|37199211, gi\|... - gi\|37680463\|ref\|NP_935072.1\| hypothetical protein VV2279 [Vibrio vulnificus YJ016], gi\|37199211\|dbj\|...	3.0E-29	[4..130]	[8..134]
gi\|28897830, gi\|... - gi\|28897830\|ref\|NP_797435.1\| hypothetical protein VP1056 [Vibrio parahaemolyticus RIMD 2210633], gi\|... gi\|28806043 - gi\|28806043\|dbj\|BAC59319.1\| conserved hypothetical protein [Vibrio parahaemolyticus RIMD 2210633]	4.0E-29	[4..130]	[8..134]
gi\|89098431, gi\|... - gi\|89098431\|ref\|ZP_01171315.1\| hypothetical protein B14911_12282 [Bacillus sp. NRRL B-14911], gi\|890...	5.0E-29	[1..138]	[1..138]
gi\|85830877, gi\|... - gi\|86142845\|ref\|ZP_01061284.1\| putative thioesterase [Flavobacterium sp. MED217], gi\|85830877\|gb\|EAQ... gi\|85830877, gi\|... - gi\|86142845\|ref\|ZP_01061284.1\| putative thioesterase [Flavobacterium sp. MED217], gi\|85830877\|gb\|EAQ...	6.0E-29	[1..132]	[1..132]
gi\|56379939, gi\|... - gi\|56420097\|ref\|YP_147415.1\| hypothetical protein GK1562 [Geobacillus kaustophilus HTA426], gi\|56379...	6.0E-29	[1..137]	[1..137]
gi\|77163679, gi\|... - gi\|77163679\|ref\|YP_342204.1\| 4-hydroxybenzoyl-CoA thioesterase [Nitrosococcus oceani ATCC 19707], gi... gi\|207088616 - gi\|207088616\|gb\|EDZ65888.1\| tol-pal system-associated acyl-CoA thioesterase [Nitrosococcus oceani AF... gi\|224408962, gi... - gi\|254435505\|ref\|ZP_05049012.1\| tol-pal system-associated acyl-CoA thioesterase [Nitrosococcus ocean...	1.0E-28	[1..130]	[1..131]
gi\|51975399, gi\|... - gi\|52141930\|ref\|YP_084898.1\| 4-hydroxybenzoyl-CoA thioesterase [Bacillus cereus E33L], gi\|51975399\|g...	2.0E-28	[1..139]	[1..139]
gi\|152024734, gi... - gi\|89203345\|ref\|ZP_01182020.1\| 4-hydroxybenzoyl-CoA thioesterase [Bacillus cereus subsp. cytotoxis N...	2.0E-28	[1..139]	[1..139]
gi\|30021707, gi\|... - gi\|30021707\|ref\|NP_833338.1\| esterase [Bacillus cereus ATCC 14579], gi\|29897262\|gb\|AAP10539.1\| Ester... gi\|228654582, gi... - gi\|229128877\|ref\|ZP_04257853.1\| 4-hydroxybenzoyl-CoA thioesterase [Bacillus cereus BDRD-Cer4], gi\|22... gi\|228724030, gi... - gi\|229047288\|ref\|ZP_04192887.1\| 4-hydroxybenzoyl-CoA thioesterase [Bacillus cereus AH676], gi\|228724...	2.0E-28	[1..139]	[1..139]

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Predicted Domain #1

Region A:
Residues: [1-139]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFVAEHEVEI RYAETDQMGV VYHSNYLVWL ELGRTKLIQD LGFSYVEMEK EGIISPVLDL  60
   61 QISYRKAMRY GEKAIVKTWV DTVSPLRVVY GYEIYNGDGE LCITASTTNI CAKKEGFRPV 120
  121 SFKKFYPEWY AKYEEIKKK

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	26.221849
Match:	1s5uA
Description:	Crystal Structure of Hypothetical Protein EC709 from Escherichia coli
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
catalytic activity	0.74605540351792	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: