YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30257353, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	253 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30257353, gi|....

Description	E-value	Query Range	Subject Range
gi\|52142756, gi\|... - gi\|52142756\|ref\|YP_084072.1\| spore cortex-lytic enzyme [Bacillus cereus E33L], gi\|51976225\|gb\|AAU177...	2.0E-68	[1..253]	[1..253]
gi\|47554283, gi\|... - gi\|47569014\|ref\|ZP_00239704.1\| spore cortex-lytic enzyme prepeptide [Bacillus cereus G9241], gi\|4755...	2.0E-66	[1..253]	[1..259]
SLEB_BACCR - Spore cortex-lytic enzyme OS=Bacillus cereus (strain ATCC 14579 / DSM 31 / JCM 2152 / NBRC 15305 / N... SLEB_BACCE - Spore cortex-lytic enzyme OS=Bacillus cereus GN=sleB PE=1 SV=1 gi\|228921423, gi... - gi\|228921423\|ref\|ZP_04084746.1\| Spore cortex-lytic enzyme [Bacillus thuringiensis serovar huazhongen... gi\|228819802, gi... - gi\|228939871\|ref\|ZP_04102448.1\| Spore cortex-lytic enzyme [Bacillus thuringiensis serovar berliner A... gi\|228985846, gi... - gi\|228985846\|ref\|ZP_04145995.1\| Spore cortex-lytic enzyme [Bacillus thuringiensis serovar tochigiens... gi\|229070227, gi... - gi\|229070227\|ref\|ZP_04203479.1\| Spore cortex-lytic enzyme [Bacillus cereus F65185], gi\|228712890\|gb\|... gi\|228786976, gi... - gi\|228972761\|ref\|ZP_04133360.1\| Spore cortex-lytic enzyme [Bacillus thuringiensis serovar thuringien... gi\|228979345, gi... - gi\|228979345\|ref\|ZP_04139681.1\| Spore cortex-lytic enzyme [Bacillus thuringiensis Bt407], gi\|2287803... gi\|229116269, gi... - gi\|229116269\|ref\|ZP_04245659.1\| Spore cortex-lytic enzyme [Bacillus cereus Rock1-3], gi\|228667101\|gb... gi\|228655367, gi... - gi\|229128092\|ref\|ZP_04257074.1\| Spore cortex-lytic enzyme [Bacillus cereus BDRD-Cer4], gi\|228655367\|... gi\|218161962, gi... - gi\|218234005\|ref\|YP_002367468.1\| spore cortex-lytic enzyme prepeptide [Bacillus cereus B4264], gi\|21... gi\|228703319, gi... - gi\|229079940\|ref\|ZP_04212471.1\| Spore cortex-lytic enzyme [Bacillus cereus Rock4-2], gi\|228703319\|gb... gi\|229103362, gi... - gi\|229103362\|ref\|ZP_04234044.1\| Spore cortex-lytic enzyme [Bacillus cereus Rock3-28], gi\|228679858\|g... gi\|229179035, gi... - gi\|229179035\|ref\|ZP_04306392.1\| Spore cortex-lytic enzyme [Bacillus cereus 172560W], gi\|228604403\|gb... gi\|228592637, gi... - gi\|229190847\|ref\|ZP_04317839.1\| Spore cortex-lytic enzyme [Bacillus cereus ATCC 10876], gi\|228592637... gi\|228638167, gi... - gi\|229145328\|ref\|ZP_04273717.1\| Spore cortex-lytic enzyme [Bacillus cereus BDRD-ST24], gi\|228638167\|... gi\|228627205, gi... - gi\|229156330\|ref\|ZP_04284426.1\| Spore cortex-lytic enzyme [Bacillus cereus ATCC 4342], gi\|228627205\|...	2.0E-66	[1..253]	[1..259]
gi\|222096255, gi... - gi\|222096255\|ref\|YP_002530312.1\| spore cortex-lytic enzyme prepeptide [Bacillus cereus Q1], gi\|22124... gi\|217063319, gi... - gi\|217960192\|ref\|YP_002338752.1\| spore cortex-lytic enzyme prepeptide [Bacillus cereus AH187], gi\|21... gi\|229139388, gi... - gi\|229139388\|ref\|ZP_04267959.1\| Spore cortex-lytic enzyme [Bacillus cereus BDRD-ST26], gi\|228643935\|... gi\|206973778, gi... - gi\|206973778\|ref\|ZP_03234696.1\| spore cortex-lytic enzyme prepeptide [Bacillus cereus H3081.97], gi\|... gi\|42737762, gi\|... - gi\|42781838\|ref\|NP_979085.1\| spore cortex-lytic enzyme prepeptide [Bacillus cereus ATCC 10987], gi\|4...	5.0E-66	[1..253]	[1..259]
gi\|228649678, gi... - gi\|229133643\|ref\|ZP_04262469.1\| Spore cortex-lytic enzyme [Bacillus cereus BDRD-ST196], gi\|228649678... gi\|163940501, gi... - gi\|89209416\|ref\|ZP_01187838.1\| Peptidoglycan-binding domain 1:Cell wall hydrolase, SleB [Bacillus we... gi\|229012007, gi... - gi\|229012007\|ref\|ZP_04169186.1\| Spore cortex-lytic enzyme [Bacillus mycoides DSM 2048], gi\|228749095...	6.0E-66	[1..253]	[1..259]
gi\|152024415, gi... - gi\|89202332\|ref\|ZP_01181058.1\| Peptidoglycan-binding domain 1:Cell wall hydrolase, SleB [Bacillus ce...	1.0E-58	[22..253]	[22..247]
SLEB_OCEIH - Spore cortex-lytic enzyme OS=Oceanobacillus iheyensis GN=sleB PE=3 SV=1 SLEB_OCEIH - Spore cortex-lytic enzyme OS=Oceanobacillus iheyensis (strain DSM 14371 / JCM 11309 / KCTC 3954 / HT...	2.0E-57	[1..253]	[1..276]
gi\|56380608, gi\|... - gi\|56420766\|ref\|YP_148084.1\| sporulation specific N-acetylmuramoyl-L-alanine amidase (spore cortex-l...	2.0E-57	[15..253]	[6..264]
gi\|89099115, gi\|... - gi\|89099115\|ref\|ZP_01171994.1\| sporulation specific N-acetylmuramoyl-L-alanine amidase (spore cortex...	3.0E-57	[1..252]	[1..284]
gi\|28210107, gi\|... - gi\|28210107\|ref\|NP_781051.1\| spore-cortex-lytic enzyme precursor [Clostridium tetani E88], gi\|282025...	8.0E-57	[1..253]	[24..255]

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Predicted Domain #1

Region A:
Residues: [1-119]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRQKAIFKIA VLLAFIGLSL MVSSIQLKNV EAFSNQVIQR GASGEDVIEL QSRLKYNGFY  60
   61 TGKVDGVFGW GTYWALRNFQ EKFGLPVDGL AGAKTKQMLV KATKYDKSTA NKGNSGGTA

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	12.69897
Match:	1lbuA
Description:	HYDROLASE METALLO (ZN) DD-PEPTIDASE
Matching Structure (courtesy of the PDB):

Predicted Domain #2

Region A:
Residues: [120-253]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QENKPSQNKG TNVPNGYSQN DIQLMANAVY GESRGEPYLG QVAVAAVILN RVTSASFPNT  60
   61 VSGVIFEPRA FTAVADGQIY LTPNETAKKA VLDAINGWDP TGNALYYFNP DTATSKWIWT 120
  121 RPQIKKIGKH IFCK

[Run NCBI BLAST on this sequence.]

Detection Method:	FFAS03
Confidence:	1.11
Match:	2r1fA
Description:	No description for 2r1fA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits