YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30253831, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	435 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30253831, gi|....

Description	E-value	Query Range	Subject Range
gi\|30018533, gi\|... - gi\|30018533\|ref\|NP_830164.1\| adenylosuccinate lyase [Bacillus cereus ATCC 14579], gi\|29894073\|gb\|AAP...	0.0	[1..435]	[13..447]
gi\|217957849, gi... - gi\|217957849\|ref\|YP_002336393.1\| adenylosuccinate lyase [Bacillus cereus AH187], gi\|217065641\|gb\|ACJ... gi\|42735316, gi\|... - gi\|42779400\|ref\|NP_976647.1\| adenylosuccinate lyase [Bacillus cereus ATCC 10987], gi\|42735316\|gb\|AAS...	0.0	[1..435]	[1..435]
gi\|89152022, gi\|... - gi\|89200086\|ref\|ZP_01178842.1\| Adenylosuccinate lyase [Bacillus cereus subsp. cytotoxis NVH 391-98],...	0.0	[1..433]	[1..433]
gi\|52144956, gi\|... - gi\|52144956\|ref\|YP_081874.1\| adenylosuccinate lyase [Bacillus cereus E33L], gi\|51978425\|gb\|AAU19975....	0.0	[1..435]	[1..435]
gi\|163860478, gi... - gi\|89204809\|ref\|ZP_01183385.1\| Adenylosuccinate lyase [Bacillus weihenstephanensis KBAB4], gi\|891574...	0.0	[1..435]	[1..435]
gi\|75761213, gi\|... - gi\|75761213\|ref\|ZP_00741199.1\| Adenylosuccinate lyase [Bacillus thuringiensis serovar israelensis AT...	0.0	[1..435]	[13..447]
gi\|52784496, gi\|... - gi\|52784496\|ref\|YP_090325.1\| adenylosuccinate lyase [Bacillus licheniformis ATCC 14580], gi\|52346998...	0.0	[1..432]	[1..430]
gi\|15613188, gi\|... - gi\|15613188\|ref\|NP_241491.1\| adenylosuccinate lyase [Bacillus halodurans C-125], gi\|10173239\|dbj\|BAB... gi\|25291511 - pir\|\|A83728 adenylosuccinate lyase purB [imported] - Bacillus halodurans (strain C-125)	0.0	[1..432]	[1..430]
PUR8_BACSU - Adenylosuccinate lyase OS=Bacillus subtilis (strain 168) GN=purB PE=1 SV=1 PUR8_BACSU - Adenylosuccinate lyase OS=Bacillus subtilis GN=purB PE=1 SV=1 gi\|221312802 - gi\|221312802\|ref\|ZP_03594607.1\| adenylosuccinate lyase [Bacillus subtilis subsp. subtilis str. NCIB ... gi\|221317726 - gi\|221317726\|ref\|ZP_03599020.1\| adenylosuccinate lyase [Bacillus subtilis subsp. subtilis str. JH642... gi\|221322004 - gi\|221322004\|ref\|ZP_03603298.1\| adenylosuccinate lyase [Bacillus subtilis subsp. subtilis str. SMY]	0.0	[1..432]	[1..430]
gi\|89084274, gi\|... - gi\|89101013\|ref\|ZP_01173856.1\| adenylosuccinate lyase [Bacillus sp. NRRL B-14911], gi\|89084274\|gb\|EA...	0.0	[1..432]	[1..430]

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Predicted Domain #1

Region A:
Residues: [1-435]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISRYTRPEM GAIWTEENKF KAWLEVEILA CEAWAELGDI PKEDVKKIRE HASFDIDRIY  60
   61 EIEKETRHDV VAFTRAVSET PALGEERKWV HYGLTSTDVV DTALSYILKQ ANEIILKDLE 120
  121 NFVSILANKA KEHKYTIMMG RTHGVHAEPT TFGLKLGLWY EEMKRNVERF KQAANTVRVG 180
  181 KLSGAVGTYA NIDPFVEKYV CENLGLEAAP ISTQTLQRDR HAHYMSTLAL IATSIEKMAV 240
  241 EIRGLQKSET REVEEAFAKG QKGSSAMPHK RNPIGSENMT GLARVIRGYM MTAYENVPLW 300
  301 HERDISHSSA ERVILPDATI ALNYMLNRFG NIVKNLTVYP ENMKRNMTRT YGLIYSQRVM 360
  361 LTLIDKGMVR EEAYDIVQPK AMEAWETQVQ FKELVEADER ITSKLTQEEI NECFNYEHHM 420
  421 QHVDTIFERL GLNEA

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	135.0
Match:	2pfmA
Description:	No description for 2pfmA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits