YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30258494, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	329 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30258494, gi|....

Description	E-value	Query Range	Subject Range
gi\|67518406, gi\|... - gi\|92115105\|ref\|YP_575033.1\| signal recognition particle-docking protein FtsY [Chromohalobacter sale...	5.0E-71	[6..320]	[180..493]
gi\|148550186, gi... - gi\|82736091\|ref\|ZP_00898951.1\| Cell division transporter substrate-binding protein FtsY [Pseudomonas...	1.0E-70	[12..322]	[187..495]
gi\|26991787, gi\|... - gi\|26991787\|ref\|NP_747212.1\| signal recognition particle-docking protein FtsY [Pseudomonas putida KT...	3.0E-70	[12..322]	[184..492]
gi\|229157423, gi... - gi\|229157423\|ref\|ZP_04285501.1\| Cell division protein ftsY [Bacillus cereus ATCC 4342], gi\|228626150... gi\|47570280, gi\|... - gi\|47570280\|ref\|ZP_00240929.1\| signal recognition particle-docking protein FtsY [Bacillus cereus G92...	3.0E-70	[1..329]	[1..329]
gi\|95108568, gi\|... - gi\|95108568\|emb\|CAK13262.1\| cell division protein FtsY [Pseudomonas entomophila L48], gi\|104779581\|r... gi\|95108568 - gi\|95108568\|emb\|CAK13262.1\| cell division protein FtsY [Pseudomonas entomophila L48]	4.0E-70	[15..322]	[215..520]
gi\|42782939, gi\|... - gi\|42782939\|ref\|NP_980186.1\| signal recognition particle-docking protein FtsY [Bacillus cereus ATCC ...	4.0E-70	[1..329]	[1..329]
gi\|30021935, gi\|... - gi\|30021935\|ref\|NP_833566.1\| cell division protein ftsY [Bacillus cereus ATCC 14579], gi\|29897491\|gb... gi\|229129123, gi... - gi\|229129123\|ref\|ZP_04258096.1\| Cell division protein ftsY [Bacillus cereus BDRD-Cer4], gi\|228654360...	4.0E-70	[1..329]	[1..329]
gi\|51975101, gi\|... - gi\|52141632\|ref\|YP_085188.1\| recognition particle-docking protein [Bacillus cereus E33L], gi\|5197510... gi\|196026848, gi... - gi\|196042326\|ref\|ZP_03109602.1\| signal recognition particle-docking protein FtsY [Bacillus cereus NV... gi\|225786630, gi... - gi\|225865828\|ref\|YP_002751206.1\| signal recognition particle-docking protein FtsY [Bacillus cereus 0... gi\|228597263, gi... - gi\|229186087\|ref\|ZP_04313256.1\| Cell division protein ftsY [Bacillus cereus BGSC 6E1], gi\|228597263\|... gi\|118418294, gi... - gi\|118479069\|ref\|YP_896220.1\| signal recognition particle-docking protein FtsY [Bacillus thuringiens... gi\|228843063, gi... - gi\|228916484\|ref\|ZP_04080050.1\| Cell division protein ftsY [Bacillus thuringiensis serovar pulsiensi...	6.0E-70	[1..329]	[1..329]
FTSY_BACSU - Cell division protein FtsY homolog OS=Bacillus subtilis GN=ftsY PE=1 SV=2 FTSY_BACSU - Signal recognition particle receptor FtsY OS=Bacillus subtilis (strain 168) GN=ftsY PE=1 SV=2 gi\|221313795 - gi\|221313795\|ref\|ZP_03595600.1\| signal recognition particle (docking protein) [Bacillus subtilis sub... gi\|221318719 - gi\|221318719\|ref\|ZP_03600013.1\| signal recognition particle (docking protein) [Bacillus subtilis sub... gi\|221322990 - gi\|221322990\|ref\|ZP_03604284.1\| signal recognition particle (docking protein) [Bacillus subtilis sub...	2.0E-69	[1..328]	[1..328]
gi\|1237019, gi\|1... - gi\|1237019\|dbj\|BAA08616.1\| Srb [Bacillus subtilis], gi\|1237016\|dbj\|BAA10978.1\| Srb [Bacillus subtili...	3.0E-69	[1..328]	[1..328]

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Predicted Domain #1

Region A:
Residues: [1-329]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFFKKLKEK ISKQTDTVTE KFKQGLEKTR NSFADKVNDL VFRYRKVDED FFEELEEILI  60
   61 GADVGVSTVM ELIDQLKEEV QRRNIQDPRE VQAVISEKLI EIYKGDSDFT NEVNMQKDGL 120
  121 TVVLFVGVNG VGKTTTIGKM AHKFKSEGKS VLLAAGDTFR AGAIEQLEVW GDRVGVEVIK 180
  181 QGSGSDPAAV MYDAVQAAKA RNVDVLLCDT AGRLQNKVNL MKELEKVKRV IEREVPGAPH 240
  241 EVLLVIDATT GQNGLSQAKT FREATNVTGI VLTKLDGTAK GGIVLAIRNE MDVPVKFVGL 300
  301 GEQMDDLQQF DPEQYVYGLF ANLVETEEV

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	61.0
Match:	2qy9A
Description:	No description for 2qy9A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits