YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30262359, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	486 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30262359, gi|....

Description	E-value	Query Range	Subject Range
gi\|45523555, gi\|... - gi\|67925207\|ref\|ZP_00518574.1\| Aldehyde dehydrogenase (NAD+) [Crocosphaera watsonii WH 8501], gi\|678...	0.0	[9..484]	[16..489]
AL1A1_SHEEP - Retinal dehydrogenase 1 OS=Ovis aries GN=ALDH1A1 PE=1 SV=2	0.0	[1..484]	[13..495]
AL1A1_BOVIN - Retinal dehydrogenase 1 OS=Bos taurus GN=ALDH1A1 PE=2 SV=3	0.0	[1..484]	[13..495]
gi\|52785994, gi\|... - gi\|52785994\|ref\|YP_091823.1\| DhaS [Bacillus licheniformis ATCC 14580], gi\|52348496\|gb\|AAU41130.1\| Dh...	0.0	[10..483]	[24..494]
gi\|60653829, gi\|... - gi\|60653831\|gb\|AAX29608.1\| aldehyde dehydrogenase 1 family member A1 [synthetic construct], gi\|60653...	0.0	[1..484]	[13..495]
gi\|2183299 - gi\|2183299\|gb\|AAC51652.1\| aldehyde dehydrogenase 1 [Homo sapiens]	0.0	[1..484]	[13..495]
gi\|197100827 - gi\|197100827\|ref\|NP_001127609.1\| aldehyde dehydrogenase 1A1 [Pongo abelii] gi\|55732507 - gi\|55732507\|emb\|CAH92954.1\| hypothetical protein [Pongo abelii]	0.0	[1..484]	[13..495]
gi\|114624618, gi... - gi\|114624620\|ref\|XP_001170480.1\| PREDICTED: similar to aldehyde dehydrogenase (NAD) (EC 1.2.1.3) 5 p...	0.0	[2..484]	[30..511]

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Predicted Domain #1

Region A:
Residues: [1-486]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MITTEIKRVK NHINGEWVES TGTEVEAVPN PATGKIIAYV PLSPKEDVEK AVEAAKAAYE  60
   61 TWSKVPVPNR SRQLYKYLQL LQENKEELAK IITLENGKTL TDATGEVQRG IEAVELATSA 120
  121 PNLMMGQALP NIASGIDGSI WRYPIGVVAG ITPFNFPMMI PLWMFPLAIA CGNTFVLKTS 180
  181 ERTPLLAERL VELFYEAGFP KGVLNLVQGG KDVVNSILEN KDIQAVSFVG SEPVARYVYE 240
  241 TGTKHGKRVQ ALAGAKNHAI VMPDCNLEKT VQGVIGSAFA SSGERCMACS VVAVVDEIAD 300
  301 EFIDVLVAET KKLKVGDGFH EDNYVGPLIR ESHKERVLGY INSGVADGAT LLVDGRKIKE 360
  361 EVGEGYFVGA TIFDGVNQEM KIWQDEIFAP VLSIVRVKDL EEGIKLTNQS KFANGAVIYT 420
  421 SNGKHAQTFR DNIDAGMIGV NVNVPAPMAF FAFAGNKASF FGDLGTNGTD GVQFYTRKKV 480
  481 VTERWF

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	147.0
Match:	1t90A
Description:	Crystal structure of methylmalonate semialdehyde dehydrogenase from Bacillus subtilis
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits