YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30260081, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	270 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30260081, gi|....

Description	E-value	Query Range	Subject Range
gi\|119720457, gi... - gi\|119720457\|ref\|YP_920952.1\| spermidine/putrescine ABC transporter ATPase subunit [Thermofilum pend...	2.0E-87	[1..259]	[1..251]
gi\|7442577 - pir\|\|F72756 probable multiple sugar-binding transport ATP-binding protein APE0043 - Aeropyrum pernix... gi\|14600403, gi\|... - gi\|5103431\|dbj\|BAA78952.1\| 381aa long hypothetical multiple sugar-binding transport ATP-binding prot...	2.0E-87	[1..270]	[14..285]
gi\|91774964, gi\|... - gi\|91774964\|ref\|YP_544720.1\| sulphate transport system permease protein 1 [Methylobacillus flagellat...	3.0E-87	[1..245]	[1..242]
CYSA_CUCSA - Sulfate/thiosulfate import ATP-binding protein cysA OS=Cucumis sativus GN=CYSA PE=3 SV=1	5.0E-87	[1..270]	[1..267]
gi\|121594676, gi... - gi\|121594676\|ref\|YP_986572.1\| sulfate ABC transporter, ATPase subunit [Acidovorax sp. JS42], gi\|1206... gi\|221730163, gi... - gi\|222110719\|ref\|YP_002552983.1\| sulfate ABC transporter, ATPase subunit [Diaphorobacter sp. TPSY], ...	7.0E-87	[1..258]	[1..255]
gi\|121607859, gi... - gi\|121607859\|ref\|YP_995666.1\| sulfate ABC transporter, ATPase subunit [Verminephrobacter eiseniae EF...	9.0E-87	[1..270]	[1..267]
gi\|84712308, gi\|... - gi\|84712308\|ref\|ZP_01020220.1\| Sulphate transport system permease protein 1 [Polaromonas naphthaleni...	1.0E-86	[4..270]	[3..267]
gi\|89335149, gi\|... - gi\|89895701\|ref\|YP_519188.1\| hypothetical protein DSY2955 [Desulfitobacterium hafniense Y51], gi\|893...	2.0E-86	[1..267]	[84..347]
gi\|111620062, gi... - gi\|111620062\|ref\|ZP_01407060.1\| Sulphate transport system permease protein 1 [Acidovorax avenae subs...	2.0E-86	[1..267]	[120..383]

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Predicted Domain #1

Region A:
Residues: [1-270]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATLAVDAVS VGYNEGLIID GLTVEIPEGK ITTIIGPNGC GKSTLLKTAS RILKAKKGTV  60
   61 YLDGKAIEKQ PTKEIAKKMA ILPQTAEVPT GLTVFELVSY GRFPHQKGFG TLKEEDYRYI 120
  121 HWALEVTGMT EFANRPAEAL SGGQRQRVWI AMALAQGTEL LVLDEPTTYL DMAHQLEVLN 180
  181 LLKKLNEEEG RTIVMVIHDL NHASRFSDHM IALKAGKLMK QGTPDEVMTS ETLRNVFEIK 240
  241 AQIVPCPVNC KPICLTYDLA MISNQLRKKA

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	84.154902
Match:	2d62A
Description:	No description for 2d62A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits