YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30265370, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	397 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30265370, gi|....

Description	E-value	Query Range	Subject Range
gi\|52140214, gi\|... - gi\|52140214\|ref\|YP_086615.1\| cardiolipin synthetase domain-containing protein [Bacillus cereus E33L]...	1.0E-85	[1..397]	[1..397]
gi\|49481224, gi\|... - gi\|49481224\|ref\|YP_039339.1\| cardiolipin synthetase domain-containing protein [Bacillus thuringiensi...	2.0E-85	[1..397]	[1..397]
gi\|153184921, gi... - gi\|254900359\|ref\|ZP_05260283.1\| cardiolipin synthase [Listeria monocytogenes J0161], gi\|153184921\|re... CLS_LISMC - Cardiolipin synthase OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=cls PE=3 SV=1 gi\|254831074, gi... - gi\|254831074\|ref\|ZP_05235729.1\| cardiolipin synthase [Listeria monocytogenes 10403S], gi\|153197191\|r... gi\|254825375 - gi\|254825375\|ref\|ZP_05230376.1\| cardiolipin synthase [Listeria monocytogenes FSL J1-194] gi\|127764490, gi... - gi\|254913402\|ref\|ZP_05263414.1\| cardiolipin synthase [Listeria monocytogenes J2818], gi\|153192162\|re... gi\|254853969 - gi\|254853969\|ref\|ZP_05243317.1\| cardiolipin synthase [Listeria monocytogenes FSL R2-503] gi\|153168611, gi... - gi\|153168611\|ref\|ZP_01928434.1\| cardiolipin synthetase [Listeria monocytogenes FSL N1-017], gi\|13372... gi\|254879171 - gi\|254879171\|ref\|ZP_05251881.1\| cardiolipin synthase [Listeria monocytogenes FSL J2-071] gi\|133729180, gi... - gi\|254828078\|ref\|ZP_05232765.1\| cardiolipin synthase [Listeria monocytogenes FSL N3-165], gi\|1531757... gi\|255025951 - gi\|255025951\|ref\|ZP_05297937.1\| cardiolipin synthase [Listeria monocytogenes FSL J2-003] CLS_LISMO - Cardiolipin synthase OS=Listeria monocytogenes GN=cls PE=3 SV=1 gi\|153180597, gi... - gi\|254937783\|ref\|ZP_05269480.1\| cardiolipin synthase [Listeria monocytogenes F6900], gi\|153180597\|re... gi\|255520611 - gi\|255520611\|ref\|ZP_05387848.1\| cardiolipin synthase [Listeria monocytogenes FSL J1-175] gi\|254932256, gi... - gi\|254932256\|ref\|ZP_05265615.1\| cardiolipin synthase [Listeria monocytogenes HPB2262], gi\|153204089\|... gi\|224499858 - gi\|224499858\|ref\|ZP_03668207.1\| cardiolipin synthetase [Listeria monocytogenes Finland 1988] CLS_LISMC - Cardiolipin synthase OS=Listeria monocytogenes serotype 4b (strain CLIP80459) GN=cls PE=3 SV=1 CLS_LISMF - Cardiolipin synthase OS=Listeria monocytogenes serotype 4b (strain F2365) GN=cls PE=3 SV=1 gi\|224503256 - gi\|224503256\|ref\|ZP_03671563.1\| cardiolipin synthetase [Listeria monocytogenes FSL R2-561] CLS_LISMO - Cardiolipin synthase OS=Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e) GN=cls PE=... gi\|47015557, gi\|... - gi\|47096096\|ref\|ZP_00233697.1\| cardiolipin synthetase [Listeria monocytogenes str. 1/2a F6854], gi\|4... gi\|47092789, gi\|... - gi\|47092789\|ref\|ZP_00230574.1\| cardiolipin synthetase [Listeria monocytogenes str. 4b H7858], gi\|470...	2.0E-85	[19..397]	[98..482]
CLS_LISIN - Cardiolipin synthase OS=Listeria innocua serovar 6a (strain CLIP 11262) GN=cls PE=3 SV=1 CLS_LISIN - Cardiolipin synthase OS=Listeria innocua GN=cls PE=3 SV=1	3.0E-85	[19..397]	[98..482]
gi\|42740454, gi\|... - gi\|42784522\|ref\|NP_981769.1\| cardiolipin synthetase domain-containing protein [Bacillus cereus ATCC ...	7.0E-85	[1..397]	[1..397]
gi\|106893314, gi... - gi\|158319290\|ref\|YP_001511797.1\| phospholipase D/transphosphatidylase [Alkaliphilus oremlandii OhILA...	2.0E-84	[17..397]	[95..479]
gi\|68446672, gi\|... - gi\|70725948\|ref\|YP_252862.1\| hypothetical protein SH0947 [Staphylococcus haemolyticus JCSC1435], gi\|...	3.0E-84	[20..397]	[111..494]
CLS_OCEIH - Cardiolipin synthase OS=Oceanobacillus iheyensis (strain DSM 14371 / JCM 11309 / KCTC 3954 / HTE831)... CLS_OCEIH - Cardiolipin synthase OS=Oceanobacillus iheyensis GN=cls PE=3 SV=1	5.0E-84	[20..397]	[99..479]
gi\|56963585, gi\|... - gi\|56963585\|ref\|YP_175316.1\| cardiolipin synthetase [Bacillus clausii KSM-K16], gi\|56909828\|dbj\|BAD6...	1.0E-83	[22..397]	[107..488]
gi\|53689330 - gi\|53689330\|ref\|ZP_00063684.2\| COG1502: Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin ...	2.0E-83	[14..397]	[80..471]

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Predicted Domain #1

Region A:
Residues: [1-397]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFFLPLLLIG IALWIIIDLS YGRIVHLRRV RSRSFPLRQS DFHLYTYGKD LYDTLFTDIK  60
   61 QAKHHVHVLF FIVKNDKISR EFLKLLIDKA KEGIEVRLLL DRLGSHHLSN EAIRSLQKHG 120
  121 VSFSFCHKVK FPFPFFSANQ RNHRKITVID GKIGYIGGFN IGEEYLGHNE RLGLWRDYHL 180
  181 RLTGEGVQDL QKQFLHDWFD DTNQNLLVAS LYFPKQQPGT IQHQFIPTDG AYLQHTFLHL 240
  241 IEGAKKELFI GTPYFIPGRK IMNALLEARK RGVQITILVP EKADHALVRE AKFPYCRKLI 300
  301 QAGCNIYAFQ QGFFHAKVII VDDYICDIGT ANFDMRSLYI NHEINCLLYD KHFIQTVRNK 360
  361 FHKDLGNASL LSFKDVSPHS LIDRGKEWIG TILAFFL

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	31.69897
Match:	1xdoA
Description:	Crystal Structure of Escherichia coli Polyphosphate Kinase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
catalytic activity	1.66280208217584	bayes_pls_golite062009
phosphoric diester hydrolase activity	1.06227220880142	bayes_pls_golite062009
phosphoric ester hydrolase activity	0.27587835691419	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: