YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30265294, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	427 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30265294, gi|....

Description	E-value	Query Range	Subject Range
gi\|88949689, gi\|... - gi\|88949689\|ref\|ZP_01152304.1\| UDP-glucose 6-dehydrogenase [Halorhodospira halophila SL1], gi\|889268...	2.0E-98	[1..426]	[1..443]
gi\|114225845, gi... - gi\|78702286\|ref\|ZP_00866726.1\| UDP-glucose 6-dehydrogenase [Alkalilimnicola ehrlichei MLHE-1], gi\|78...	8.0E-98	[1..426]	[1..443]
gi\|83635660, gi\|... - gi\|83647617\|ref\|YP_436052.1\| UDP-glucose 6-dehydrogenase [Hahella chejuensis KCTC 2396], gi\|83635660...	3.0E-97	[1..426]	[1..443]
gi\|74316979, gi\|... - gi\|74316979\|ref\|YP_314719.1\| UDP-glucose dehydrogenase [Thiobacillus denitrificans ATCC 25259], gi\|7...	1.0E-96	[1..423]	[1..440]
gi\|78193897, gi\|... - gi\|78222642\|ref\|YP_384389.1\| UDP-glucose/GDP-mannose dehydrogenase [Geobacter metallireducens GS-15]...	2.0E-96	[1..425]	[1..446]
gi\|85777231, gi\|... - gi\|86160720\|ref\|YP_467505.1\| UDP-glucose 6-dehydrogenase [Anaeromyxobacter dehalogenans 2CP-C], gi\|8...	5.0E-96	[1..422]	[1..432]
gi\|37526392, gi\|... - gi\|37526392\|ref\|NP_929736.1\| hypothetical protein plu2500 [Photorhabdus luminescens subsp. laumondii...	5.0E-96	[1..426]	[1..443]
gi\|77955807, gi\|... - gi\|77955807\|ref\|ZP_00820145.1\| UDP-glucose 6-dehydrogenase [Marinobacter aquaeolei VT8], gi\|77865306...	5.0E-96	[1..423]	[1..440]
gi\|88818028, gi\|... - gi\|88860034\|ref\|ZP_01134673.1\| hypothetical protein PTD2_18520 [Pseudoalteromonas tunicata D2], gi\|8...	5.0E-96	[1..426]	[1..443]
gi\|39996915, gi\|... - gi\|39996915\|ref\|NP_952866.1\| UDP-glucose 6-dehydrogenase [Geobacter sulfurreducens PCA], gi\|39983803...	1.0E-95	[1..425]	[1..448]

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Predicted Domain #1

Region A:
Residues: [1-427]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKICTMGLGY IGLPTSAMFA KYGTEVVGVD IHQKVVDKLN NGEIHIEEPG LGEVVKEVVA  60
   61 NGKFRASLTP EEADAFIISV PTPNHDDEHK SCDLSYVLTA TEKVLPFVKK GNVIIVESTI 120
  121 APRSMDDYVK PLVEEAGFTV GEDIYLVHCP ERVLPGQILH ELVHNNRIVG GVTPACAEAG 180
  181 ARVYGVFVEG EIIKTNAKTA EMSKLMENTF RDVNIALANE LTKVCNSLDI NVLDVIEMAN 240
  241 KHPRVNLHYP GPGVGGHCLA VDPYFIVAKA PELANIIKLS RETNVSMPHY VTEKVKELLA 300
  301 GVENPKVAAF GVTYKGNVDD MRESPAMDVI DLIRNEGITV SAHDPHVESD FFELHSAEEA 360
  361 VKDAHLILVL TDHDEFKTMN YDSLAPYMAK TVVFDTRNCV QAVSTGEMKI INFGTLYEAL 420
  421 NKNVMMV

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	80.09691
Match:	2q3eA
Description:	No description for 2q3eA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits