YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|49182032, gi\|...
Organism:	Bacillus anthracis str. Sterne
Length:	268 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|49182032, gi|....

Description	E-value	Query Range	Subject Range
gi\|110603650, gi... - gi\|110603650\|ref\|ZP_01391726.1\| daunorubicin resistance ABC transporter membrane protein [Methanocul...	1.0E-38	[18..261]	[347..591]
gi\|18152891 - gi\|18152891\|gb\|AAK62810.2\|AF227914_1 ATP-binding cassette transporter ABC1 [Venturia inaequalis]	9.0E-34	[10..260]	[524..775]
gi\|66825431, gi\|... - gi\|66825431\|ref\|XP_646070.1\| ABC transporter G family protein [Dictyostelium discoideum AX4], gi\|604... ABCGE_DICDI - ABC transporter G family member 14 OS=Dictyostelium discoideum GN=abcG14 PE=3 SV=1	2.0E-33	[13..243]	[1120..1352]
gi\|19550714 - gi\|19550714\|gb\|AAL91499.1\|AF482392_1 ABC transporter AbcG14 [Dictyostelium discoideum]	2.0E-33	[13..243]	[1120..1352]
gi\|20522008 - gi\|20522008\|dbj\|BAB92011.1\| pleiotropic drug resistance like protein [Nicotiana tabacum]	4.0E-33	[13..230]	[1159..1379]
gi\|3114719, gi\|1... - gi\|3114719\|emb\|CAA93142.1\| ATP-binding multidrug cassette transporter [Botryotinia fuckeliana], pir\|...	3.0E-32	[17..242]	[1216..1442]
gi\|49122482, gi\|... - gi\|67902714\|ref\|XP_681613.1\| hypothetical protein AN8344.2 [Aspergillus nidulans FGSC A4], ref\|XP_41...	2.0E-31	[12..235]	[465..687]

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Predicted Domain #1

Region A:
Residues: [1-64]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSLKTIIKE QYENLYLIRR LSLYELKQAY AGNLLGLLWV FLNPLSQIGV YWLVFGLGIR  60
   61 GGAP

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [65-268]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VHGVPYFVWL VCGLVTWFFV GTTITQSANS IYSRLNTVSK MNFPLSIIPT YVVISQLYTH  60
   61 LILIIFALVI VIFNLGFSTI NILELMYGLV ASTLFLIALS FLTSTLSTML RDIQLLIQSV 120
  121 TRMLFFLTPI FWEPKENMSN LLLFIIKINP LYYIVEVYRG ALIYNDTSIV LSWYTLYFWG 180
  181 AVIILFIAGS MLHIRFRKQF VDYL

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits