YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30265187, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	270 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30265187, gi|....

Description	E-value	Query Range	Subject Range
gi\|67547059, gi\|... - gi\|67547059\|ref\|ZP_00424966.1\| Prolipoprotein diacylglyceryl transferase [Burkholderia vietnamiensis...	8.0E-81	[2..266]	[157..452]
gi\|89098768, gi\|... - gi\|89098768\|ref\|ZP_01171649.1\| prolipoprotein diacylglyceryl transferase [Bacillus sp. NRRL B-14911]...	2.0E-78	[6..269]	[7..271]
gi\|108770433, gi... - gi\|108800014\|ref\|YP_640211.1\| prolipoprotein diacylglyceryl transferase [Mycobacterium sp. MCS], gi\|... gi\|119695228, gi... - gi\|92916537\|ref\|ZP_01285156.1\| Prolipoprotein diacylglyceryl transferase [Mycobacterium sp. KMS], gi...	3.0E-78	[2..266]	[4..281]
gi\|126235443, gi... - gi\|92908023\|ref\|ZP_01276802.1\| Prolipoprotein diacylglyceryl transferase [Mycobacterium sp. JLS], gi...	3.0E-78	[2..266]	[4..281]
gi\|74492845, gi\|... - gi\|75759649\|ref\|ZP_00739733.1\| Prolipoprotein diacylglyceryl transferase [Bacillus thuringiensis ser...	4.0E-78	[1..270]	[8..277]
LGT_BACCZ - Prolipoprotein diacylglyceryl transferase OS=Bacillus cereus (strain ZK / E33L) GN=lgt PE=3 SV=1 gi\|47569262, gi\|... - gi\|47569262\|ref\|ZP_00239947.1\| prolipoprotein diacylglyceryl transferase [Bacillus cereus G9241], gi... gi\|228689109, gi... - gi\|229094256\|ref\|ZP_04225332.1\| Prolipoprotein diacylglyceryl transferase [Bacillus cereus Rock3-42]...	2.0E-77	[1..270]	[1..270]
LGT_BACHK - Prolipoprotein diacylglyceryl transferase OS=Bacillus thuringiensis subsp. konkukian GN=lgt PE=3 SV=... LGT_BACHK - Prolipoprotein diacylglyceryl transferase OS=Bacillus thuringiensis subsp. konkukian (strain 97-27) ... gi\|196045707, gi... - gi\|196045707\|ref\|ZP_03112937.1\| prolipoprotein diacylglyceryl transferase [Bacillus cereus 03BB108],... LGT_BACC3 - Prolipoprotein diacylglyceryl transferase OS=Bacillus cereus (strain 03BB102) GN=lgt PE=3 SV=1 gi\|228596074, gi... - gi\|229187370\|ref\|ZP_04314513.1\| Prolipoprotein diacylglyceryl transferase [Bacillus cereus BGSC 6E1]...	2.0E-77	[1..270]	[1..270]
LGT_BACCR - Prolipoprotein diacylglyceryl transferase OS=Bacillus cereus (strain ATCC 14579 / DSM 31 / JCM 2152 ... gi\|229050822, gi... - gi\|229050822\|ref\|ZP_04194374.1\| Prolipoprotein diacylglyceryl transferase [Bacillus cereus AH676], g... gi\|228635700, gi... - gi\|229147687\|ref\|ZP_04276030.1\| Prolipoprotein diacylglyceryl transferase [Bacillus cereus BDRD-ST24... gi\|229112568, gi... - gi\|229112568\|ref\|ZP_04242105.1\| Prolipoprotein diacylglyceryl transferase [Bacillus cereus Rock1-15]... gi\|229130406, gi... - gi\|229130406\|ref\|ZP_04259364.1\| Prolipoprotein diacylglyceryl transferase [Bacillus cereus BDRD-Cer4...	3.0E-77	[1..270]	[1..270]
LGT1_BACC1 - Prolipoprotein diacylglyceryl transferase 1 OS=Bacillus cereus (strain ATCC 10987 / NRS 248) GN=lgt1...	7.0E-77	[1..270]	[1..270]
gi\|228746920, gi... - gi\|229014320\|ref\|ZP_04171439.1\| Prolipoprotein diacylglyceryl transferase [Bacillus mycoides DSM 204... gi\|229135964, gi... - gi\|229135964\|ref\|ZP_04264725.1\| Prolipoprotein diacylglyceryl transferase [Bacillus cereus BDRD-ST19... gi\|228716445, gi... - gi\|229063808\|ref\|ZP_04200112.1\| Prolipoprotein diacylglyceryl transferase [Bacillus cereus AH603], g... LGT_BACWK - Prolipoprotein diacylglyceryl transferase OS=Bacillus weihenstephanensis (strain KBAB4) GN=lgt PE=3 ...	2.0E-76	[1..270]	[1..270]

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Predicted Domain #1

Region A:
Residues: [1-116]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLGSVPQLD RVAVQLGPFP VYWYGIIIGT GVLLGLWLAT REGERLGIPK DTFVDLVLIA  60
   61 VPIAILFARM YYVIFEWEYY AQNPSQIINI RQGGLAIHGG LIGAVVTGIL FAKRRG

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [117-270]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VSFWKLADIA APSILLGQAI GRWGNFMNQE AHGDEVTRQF LEGLHLPDFI INQMYIDGVY  60
   61 YHPTFLYESL WNFAGVILLL ALRKVNLRRG ELFFTYLIWY SIGRFFVEGL RTDSLMLGPL 120
  121 RIAQVMSIGL VVISIIFIIV RRKMGQADKR YSEN

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits