YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30259791, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	305 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30259791, gi|....

Description	E-value	Query Range	Subject Range
gi\|89200122, gi\|... - gi\|89200122\|ref\|ZP_01178877.1\| UDP-N-acetylenolpyruvoylglucosamine reductase [Bacillus cereus subsp....	7.0E-69	[1..303]	[1..303]
gi\|228856002, gi... - gi\|228903573\|ref\|ZP_04067694.1\| UDP-N-acetylenolpyruvoylglucosamine reductase [Bacillus thuringiensi... gi\|228848860, gi... - gi\|228910909\|ref\|ZP_04074718.1\| UDP-N-acetylenolpyruvoylglucosamine reductase [Bacillus thuringiensi... gi\|74491957, gi\|... - gi\|75760561\|ref\|ZP_00740595.1\| UDP-N-acetylenolpyruvoylglucosamine reductase [Bacillus thuringiensis... gi\|218544314, gi... - gi\|218900220\|ref\|YP_002448631.1\| UDP-N-acetylenolpyruvoylglucosamine reductase [Bacillus cereus G984...	2.0E-67	[1..305]	[1..305]
MURB_STAS1 - UDP-N-acetylenolpyruvoylglucosamine reductase OS=Staphylococcus saprophyticus subsp. saprophyticus (...	3.0E-67	[1..302]	[1..302]
MURB2_BACHK - UDP-N-acetylenolpyruvoylglucosamine reductase 2 OS=Bacillus thuringiensis subsp. konkukian GN=murB2 ... MURB2_BACHK - UDP-N-acetylenolpyruvoylglucosamine reductase 2 OS=Bacillus thuringiensis subsp. konkukian (strain 9...	3.0E-67	[1..305]	[1..305]
MURB2_BACC1 - UDP-N-acetylenolpyruvoylglucosamine reductase 2 OS=Bacillus cereus (strain ATCC 10987 / NRS 248) GN=...	3.0E-67	[1..305]	[1..305]
gi\|228624657, gi... - gi\|229158673\|ref\|ZP_04286731.1\| UDP-N-acetylenolpyruvoylglucosamine reductase [Bacillus cereus ATCC ... gi\|47555932, gi\|... - gi\|47567311\|ref\|ZP_00238024.1\| UDP-N-acetylenolpyruvoylglucosamine reductase [Bacillus cereus G9241]...	4.0E-67	[1..305]	[1..305]
gi\|228823183, gi... - gi\|228936351\|ref\|ZP_04099149.1\| UDP-N-acetylenolpyruvoylglucosamine reductase [Bacillus thuringiensi... MURB2_BACCZ - UDP-N-acetylenolpyruvoylglucosamine reductase 2 OS=Bacillus cereus (strain ZK / E33L) GN=murB2 PE=3 ...	5.0E-67	[1..305]	[1..305]
MURB2_BACCR - UDP-N-acetylenolpyruvoylglucosamine reductase 2 OS=Bacillus cereus (strain ATCC 14579 / DSM 31 / JCM... gi\|228961313, gi... - gi\|228961313\|ref\|ZP_04122930.1\| UDP-N-acetylenolpyruvoylglucosamine reductase [Bacillus thuringiensi... gi\|229049758, gi... - gi\|229049758\|ref\|ZP_04194315.1\| UDP-N-acetylenolpyruvoylglucosamine reductase [Bacillus cereus AH676... gi\|228835929, gi... - gi\|228923800\|ref\|ZP_04087078.1\| UDP-N-acetylenolpyruvoylglucosamine reductase [Bacillus thuringiensi... gi\|228804467, gi... - gi\|228955334\|ref\|ZP_04117342.1\| UDP-N-acetylenolpyruvoylglucosamine reductase [Bacillus thuringiensi... gi\|218235193, gi... - gi\|218235193\|ref\|YP_002369875.1\| UDP-N-acetylenolpyruvoylglucosamine reductase [Bacillus cereus B426... gi\|228670893, gi... - gi\|229112513\|ref\|ZP_04242050.1\| UDP-N-acetylenolpyruvoylglucosamine reductase [Bacillus cereus Rock1... gi\|206970054, gi... - gi\|206970054\|ref\|ZP_03231007.1\| UDP-N-acetylenolpyruvoylglucosamine reductase [Bacillus cereus AH113... gi\|228653258, gi... - gi\|229130325\|ref\|ZP_04259284.1\| UDP-N-acetylenolpyruvoylglucosamine reductase [Bacillus cereus BDRD-... gi\|229072556, gi... - gi\|229072556\|ref\|ZP_04205758.1\| UDP-N-acetylenolpyruvoylglucosamine reductase [Bacillus cereus F6518... gi\|228700747, gi... - gi\|229082315\|ref\|ZP_04214778.1\| UDP-N-acetylenolpyruvoylglucosamine reductase [Bacillus cereus Rock4... gi\|228602099, gi... - gi\|229181363\|ref\|ZP_04308692.1\| UDP-N-acetylenolpyruvoylglucosamine reductase [Bacillus cereus 17256... gi\|229193349, gi... - gi\|229193349\|ref\|ZP_04320299.1\| UDP-N-acetylenolpyruvoylglucosamine reductase [Bacillus cereus ATCC ... gi\|228635830, gi... - gi\|229147621\|ref\|ZP_04275965.1\| UDP-N-acetylenolpyruvoylglucosamine reductase [Bacillus cereus BDRD-... gi\|229153259, gi... - gi\|229153259\|ref\|ZP_04281437.1\| UDP-N-acetylenolpyruvoylglucosamine reductase [Bacillus cereus m1550...	5.0E-67	[1..305]	[1..305]
MURB_STAEQ - UDP-N-acetylenolpyruvoylglucosamine reductase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP6... MURB_STAES - UDP-N-acetylenolpyruvoylglucosamine reductase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=m...	7.0E-66	[1..302]	[1..302]
MURB_STAAM - UDP-N-acetylenolpyruvoylglucosamine reductase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) G... MURB_STAAN - UDP-N-acetylenolpyruvoylglucosamine reductase OS=Staphylococcus aureus (strain N315) GN=murB PE=1 SV... MURB_STAA2 - UDP-N-acetylenolpyruvoylglucosamine reductase OS=Staphylococcus aureus (strain JH1) GN=murB PE=3 SV=... gi\|25506456 - pir\|\|C89846 hypothetical protein SA0693 [imported] - Staphylococcus aureus (strain N315) gi\|253315829 - gi\|253315829\|ref\|ZP_04839042.1\| UDP-N-acetylenolpyruvoylglucosamine reductase [Staphylococcus aureus... gi\|255005529 - gi\|255005529\|ref\|ZP_05144130.2\| UDP-N-acetylenolpyruvoylglucosamine reductase [Staphylococcus aureus... MURB_STAA9 - UDP-N-acetylenolpyruvoylglucosamine reductase OS=Staphylococcus aureus (strain JH9) GN=murB PE=3 SV=... gi\|269202358\|ref... - UDP-N-acetylenolpyruvoylglucosamine reductase [Staphylococcus aureus subsp. aureus ED98] MURB_STAA1 - UDP-N-acetylenolpyruvoylglucosamine reductase OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN...	1.0E-65	[1..302]	[1..302]

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Predicted Domain #1

Region A:
Residues: [1-305]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNMQEVYEYL STVLPEGHVK QDEMLKNHTH IKVGGKADVF VAPTNYDEIQ EVIKYANKYN  60
   61 IPVTFLGNGS NVIIKDGGIR GITVSLIHIT GVTVTGTTIV AQCGAAIIDV SRIALDHNLT 120
  121 GLEFACGIPG SVGGALYMNA GAYGGEISFV LTEAVVMTGD GELRTLTKEA FEFGYRKSVF 180
  181 ANNHYIILEA RFELEEGVYE EIKAKMDDLT FKRESKQPLE YPSCGSVFKR PPNNFAGKLI 240
  241 QESGLQGKRI GGVEVSLKHA GFMVNVDNGT AQDYIDLIHF VQKTVEEKFG VKLEREVRII 300
  301 GEDKE

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	65.69897
Match:	1hskA
Description:	Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase (MurB), N-terminal domain; Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
catalytic activity	0.907182340515553	bayes_pls_golite062009
binding	0.088001219122031	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: