YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30259605, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	344 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30259605, gi|....

Description	E-value	Query Range	Subject Range
GLGC_LACS1 - Glucose-1-phosphate adenylyltransferase OS=Lactobacillus salivarius (strain UCC118) GN=glgC PE=3 SV=... gi\|227865869, gi... - gi\|227892320\|ref\|ZP_04010125.1\| glucose-1-phosphate adenylyltransferase [Lactobacillus salivarius AT...	1.0E-45	[1..337]	[1..374]
GLGC_LACLA - Glucose-1-phosphate adenylyltransferase OS=Lactococcus lactis subsp. lactis GN=glgC PE=3 SV=1 GLGC_LACLA - Glucose-1-phosphate adenylyltransferase OS=Lactococcus lactis subsp. lactis (strain IL1403) GN=glgC ...	2.0E-45	[1..339]	[1..376]
GLGC_LACCB - Glucose-1-phosphate adenylyltransferase OS=Lactobacillus casei (strain BL23) GN=glgC PE=3 SV=1 gi\|239629893, gi... - gi\|239629893\|ref\|ZP_04672924.1\| glucose-1-phosphate adenylyltransferase [Lactobacillus paracasei sub... GLGC_LACC3 - Glucose-1-phosphate adenylyltransferase OS=Lactobacillus casei (strain ATCC 334) GN=glgC PE=3 SV=1	2.0E-45	[1..339]	[1..377]
GLGC_LACLS - Glucose-1-phosphate adenylyltransferase OS=Lactococcus lactis subsp. cremoris (strain SK11) GN=glgC ...	1.0E-44	[1..339]	[1..376]
GLGC_STRA3 - Glucose-1-phosphate adenylyltransferase OS=Streptococcus agalactiae serotype III (strain NEM316) GN=... GLGC_STRA3 - Glucose-1-phosphate adenylyltransferase OS=Streptococcus agalactiae serotype III GN=glgC PE=3 SV=1	2.0E-44	[1..337]	[1..374]
gi\|149024925, gi... - gi\|149024925\|ref\|ZP_01836326.1\| glucose-1-phosphate adenylyltransferase [Streptococcus pneumoniae SP... GLGC_STRPJ - Glucose-1-phosphate adenylyltransferase OS=Streptococcus pneumoniae (strain ATCC 700669 / Spain 23F-... gi\|149006201, gi... - gi\|149006201\|ref\|ZP_01829913.1\| glucose-1-phosphate adenylyltransferase [Streptococcus pneumoniae SP... gi\|148994570, gi... - gi\|148994570\|ref\|ZP_01823729.1\| glucose-1-phosphate adenylyltransferase [Streptococcus pneumoniae SP... gi\|148989167, gi... - gi\|148989167\|ref\|ZP_01820557.1\| glucose-1-phosphate adenylyltransferase [Streptococcus pneumoniae SP... gi\|148985745, gi... - gi\|148985745\|ref\|ZP_01818873.1\| glucose-1-phosphate adenylyltransferase [Streptococcus pneumoniae SP... GLGC_STRPN - Glucose-1-phosphate adenylyltransferase OS=Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 ... gi\|168486464, gi... - gi\|183570517\|gb\|EDT91045.1\| glucose-1-phosphate adenylyltransferase [Streptococcus pneumoniae CDC108... gi\|168483199, gi... - gi\|172043453\|gb\|EDT51499.1\| glucose-1-phosphate adenylyltransferase [Streptococcus pneumoniae CDC187... GLGC_STRPI - Glucose-1-phosphate adenylyltransferase OS=Streptococcus pneumoniae (strain Hungary19A-6) GN=glgC PE... gi\|183572582, gi... - gi\|183572582\|gb\|EDT93110.1\| glucose-1-phosphate adenylyltransferase [Streptococcus pneumoniae SP195]... GLGC_STRPN - Glucose-1-phosphate adenylyltransferase OS=Streptococcus pneumoniae GN=glgC PE=3 SV=1 GLGC_STRZJ - Glucose-1-phosphate adenylyltransferase OS=Streptococcus pneumoniae (strain JJA) GN=glgC PE=3 SV=1 GLGC_STRZP - Glucose-1-phosphate adenylyltransferase OS=Streptococcus pneumoniae (strain P1031) GN=glgC PE=3 SV=1 GLGC_STRZT - Glucose-1-phosphate adenylyltransferase OS=Streptococcus pneumoniae (strain Taiwan19F-14) GN=glgC PE... gi\|242245399, gi... - gi\|242245399\|ref\|ZP_04799836.1\| glucose-1-phosphate adenylyltransferase [Streptococcus pneumoniae TC...	4.0E-44	[1..337]	[1..374]
GLGC_STRR6 - Glucose-1-phosphate adenylyltransferase OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=gl... gi\|25288676 - gi\|25288676\|pir\|\|F98000 glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) [imported] - Streptoco... GLGC_STRP2 - Glucose-1-phosphate adenylyltransferase OS=Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 74...	4.0E-44	[1..337]	[1..374]
gi\|254996992 - gi\|254996992\|dbj\|BAH87593.1\| putative glucose-1-phosphate adenylyltransferase [Streptococcus mutans ... GLGC_STRMU - Glucose-1-phosphate adenylyltransferase OS=Streptococcus mutans GN=glgC PE=3 SV=2 GLGC_STRMU - Glucose-1-phosphate adenylyltransferase OS=Streptococcus mutans serotype c (strain ATCC 700610 / UA1...	4.0E-44	[1..337]	[1..374]
gi\|227868451, gi... - gi\|227903564\|ref\|ZP_04021369.1\| glucose-1-phosphate adenylyltransferase [Lactobacillus acidophilus A... GLGC_LACAC - Glucose-1-phosphate adenylyltransferase OS=Lactobacillus acidophilus (strain ATCC 700396 / NCK56 / N... GLGC_LACAC - Glucose-1-phosphate adenylyltransferase OS=Lactobacillus acidophilus GN=glgC PE=3 SV=1	7.0E-44	[1..337]	[1..375]
GLGC_EXIS2 - Glucose-1-phosphate adenylyltransferase OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 /...	1.0E-43	[2..339]	[3..378]

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Predicted Domain #1

Region A:
Residues: [1-344]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGEKMLGIIN ATGSFPSLKK VTGHRSLAAL PFGGRYRLID FMLSNMVNSN IHSVAVFTSH  60
   61 KNRSLMDHVG SGKQWDLDRK RDGLFLFPPN CQCDQDEFGS FAHFRRHIDY FLRSREEYVV 120
  121 ITNSHLVTAL NFQAVLERHI HTAADITEVC HEGVSLQTYV LKKQLLLDLF EAYKDMEQYS 180
  181 LFDVVREKRG KSLHIATYEH TEYVAIIDSI ESYYKHSLEI LQPAIWKQVF KKEAPIFTKV 240
  241 KDEPPTRYVK GAAVKNTMIA NGSIIEGEVE NSVVSRSVKI GKGSIVRNSI IMQKSQIGDN 300
  301 CIIDGVIIDK DVKIGDGVVL KGNADEPYVV EKGSVQNSTI NSYS

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	34.30103
Match:	1yp2A
Description:	Crystal structure of potato tuber ADP-glucose pyrophosphorylase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
catalytic activity	2.59855937987599	bayes_pls_golite062009
acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity	2.31513836185329	bayes_pls_golite062009
transferase activity, transferring hexosyl groups	2.04393180556087	bayes_pls_golite062009
O-acyltransferase activity	1.75961983651531	bayes_pls_golite062009
UDP-glycosyltransferase activity	1.51711005399931	bayes_pls_golite062009
cytidylyltransferase activity	1.46439247968206	bayes_pls_golite062009
transferase activity	1.3237300007392	bayes_pls_golite062009
glucose-1-phosphate adenylyltransferase activity	1.1107654322416	bayes_pls_golite062009
acyltransferase activity	1.1088759555825	bayes_pls_golite062009
transferase activity, transferring acyl groups other than amino-acyl groups	1.10852250644129	bayes_pls_golite062009
transferase activity, transferring acyl groups	0.886009567107207	bayes_pls_golite062009
3-deoxy-manno-octulosonate cytidylyltransferase activity	0.83115346830439	bayes_pls_golite062009
nucleotidyltransferase activity	0.67147527259372	bayes_pls_golite062009
uridylyltransferase activity	0.54930147038803	bayes_pls_golite062009
acetylgalactosaminyltransferase activity	0.48277064848483	bayes_pls_golite062009
mannose-phosphate guanylyltransferase activity	0.38929738612511	bayes_pls_golite062009
glucose-1-phosphate thymidylyltransferase activity	0.204810937394121	bayes_pls_golite062009
guanylyltransferase activity	0.14847697203788	bayes_pls_golite062009
polypeptide N-acetylgalactosaminyltransferase activity	0.10541627748542	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: