YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30259603, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	802 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30259603, gi|....

Description	E-value	Query Range	Subject Range
gi\|22298324, gi\|... - gi\|22298324\|ref\|NP_681571.1\| glycogen phosphorylase [Thermosynechococcus elongatus BP-1], gi\|2229450...	0.0	[4..802]	[39..848]
gi\|114681358 - gi\|114681358\|ref\|XP_525293.2\| PREDICTED: brain glycogen phosphorylase [Pan troglodytes]	0.0	[4..802]	[188..999]
gi\|50054411, gi\|... - gi\|50054411\|ref\|NP_001001904.1\| brain glycogen phosphorylase [Xenopus (Silurana) tropicalis], gi\|463...	0.0	[4..802]	[24..835]
gi\|109093168 - gi\|109093168\|ref\|XP_001100456.1\| PREDICTED: brain glycogen phosphorylase isoform 3 [Macaca mulatta]	0.0	[4..802]	[24..835]
gi\|147898991, gi... - gi\|47940264\|gb\|AAH72163.1\| MGC80198 protein [Xenopus laevis], gi\|147898991\|ref\|NP_001085064.1\| hypot...	0.0	[4..802]	[24..835]
gi\|18875342, gi\|... - gi\|18875342\|ref\|NP_573461.1\| liver glycogen phosphorylase [Mus musculus], gi\|15489037\|gb\|AAH13636.1\|...	0.0	[4..802]	[24..835]

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Predicted Domain #1

Region A:
Residues: [1-802]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFTHVESFKS AFLEKLETMY GKSFKDSTTR DQYNTLGYMV REYMNSQWIA TNESYRSGER  60
   61 KQMYYLSIEF LLGRLLGSNI LNLGIRDVCE QGLSELGISL QQLEEVEADA GLGNGGLGRL 120
  121 AACFLDSLAS LDLPGHGCGI RYKHGLFDQK IVDGYQVEFP EQWLLHENVW EVRRHDQAVE 180
  181 VSYFGNVEPL YIDGRLEFRH TNAEVIMAVP YDVPVVGYET STVNTLRLWN AEPVPFPQNC 240
  241 KDILKYKRET EAVSEFLYPD DTHDEGKILR LKQQYFLVSA SLQNIVRLHR ERYGDLRQLH 300
  301 EKIAIHINDT HPVLAIPELM RILLDEEKLA WEEAWHITTQ TISYTNHTTL SEALEKWPIH 360
  361 IFKPLLPRIY MIIEEINERF CHELWERYPY EWHRIEEMAI IAHDLVKMAH LAIVGSHSVN 420
  421 GVAKIHTEIL KQREMRLFYE FYPDKFNNKT NGIAHRRWLM KANPQLTNLI SEAIGTEWKK 480
  481 EPIKLQELQL VQYDASFQEK FAEVKQERKE ILAERIHNTM GITIDPNSIF DVQVKRLHAY 540
  541 KRQLLNVLHI LYLYNRLKED ASFTFYPRTF IFGAKASPGY YYAKKIIKLI NELARKVNND 600
  601 PYVSQYMKVI FLENYRVSLA EDIFPAADVS EQISTASKEA SGTGNMKFMM NGAITLGTLD 660
  661 GANIEIKDRV GDDNCFIFGL TAEEVLHYYQ NGGYRASDYY HHNGHIKKVV DQLTNGFFAQ 720
  721 SGAEFEAIYD SLVIQNDEYF VLRDFGPYAE RQEAVGRAYE NRTKWLEMSI LNIAQSGHFA 780
  781 SDRTILQYSN EIWGIGNTVT QI

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	1000.0
Match:	1z8dA
Description:	No description for 1z8dA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits