YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30264916, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	368 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30264916, gi|....

Description	E-value	Query Range	Subject Range
MENC_BACSU - o-succinylbenzoate synthase OS=Bacillus subtilis (strain 168) GN=menC PE=1 SV=1 gi\|221324544 - gi\|221324544\|ref\|ZP_03605838.1\| O-succinylbenzoate-CoA synthase [Bacillus subtilis subsp. subtilis s... gi\|221315344 - gi\|221315344\|ref\|ZP_03597149.1\| O-succinylbenzoate-CoA synthase [Bacillus subtilis subsp. subtilis s... gi\|221320261 - gi\|221320261\|ref\|ZP_03601555.1\| O-succinylbenzoate-CoA synthase [Bacillus subtilis subsp. subtilis s... MENC_BACSU - o-succinylbenzoate synthase OS=Bacillus subtilis GN=menC PE=1 SV=1	8.0E-89	[3..359]	[4..360]
gi\|52786942, gi\|... - gi\|52786942\|ref\|YP_092771.1\| MenC [Bacillus licheniformis ATCC 14580], gi\|52349444\|gb\|AAU42078.1\| Me...	4.0E-83	[3..358]	[4..359]
ENOA_CHICK - Alpha-enolase OS=Gallus gallus GN=ENO1 PE=2 SV=2	2.0E-80	[1..350]	[1..429]
gi\|152977173, gi... - gi\|89201874\|ref\|ZP_01180608.1\| Mandelate racemase/muconate lactonizing enzyme [Bacillus cereus subsp...	4.0E-80	[1..368]	[1..368]
ENOA_ANAPL - Alpha-enolase OS=Anas platyrhynchos GN=ENO1 PE=2 SV=2	2.0E-79	[1..350]	[1..429]
gi\|49478789, gi\|... - gi\|49478789\|ref\|YP_038896.1\| enolase superfamily protein; N-acylamino acid racemase, mandelate racem...	2.0E-79	[1..368]	[1..368]
ENOA_ALLMI - Alpha-enolase OS=Alligator mississippiensis PE=2 SV=3	3.0E-79	[1..350]	[1..429]
gi\|32450571, gi\|... - gi\|32450571\|gb\|AAH54169.1\| Eno1-prov protein [Xenopus laevis], gi\|148235689\|ref\|NP_001080606.1\| enol...	4.0E-79	[1..346]	[1..425]
gi\|38649320 - gi\|38649320\|gb\|AAH63174.1\| Eno1 protein [Rattus norvegicus]	5.0E-79	[1..350]	[39..467]

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Predicted Domain #1

Region A:
Residues: [1-368]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEIKKATLHI TEMPLVIPFA ASYGTYEKRE SIVIELEDED GYIGFGEVVA FSEPWYTEET  60
   61 VKTALHVLQD FLLPDLLKAE ISHPNEVPSL FQHIKRNRMA KAGIEGAVWD LYAKRQKKSL 120
  121 ATLLGGTKSE IEVGVVIGIN TIPVMLKQIE KYAEEGYERF KVKIKPGHDY ELLKEIRKEF 180
  181 PHIPLMADAN SAYTLADTES LKRLDEFQLM MIEQPLADYD FLDHAQLQKK IETPICLDES 240
  241 IHSLEDARVA ITLGSCQIVN IKPGRVGGLT ESIQIHNYCM EHNIPVWCGG MVEMGISRAQ 300
  301 NVALASLPNF TIPGDISASS RHWEKDIISP EVTLEGGKVM VPQSVDTEYK VDRGRLAEIT 360
  361 KQRIVFER

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	75.69897
Match:	1wueA
Description:	Crystal structure of protein GI:29375081, unknown member of enolase superfamily from enterococcus faecalis V583
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits