YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30259559, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	148 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30259559, gi|....

Description	E-value	Query Range	Subject Range
gi\|228929868, gi... - gi\|228929868\|ref\|ZP_04092883.1\| cell wall surface anchor [Bacillus thuringiensis serovar pondicherie... gi\|228917473, gi... - gi\|228917473\|ref\|ZP_04081022.1\| cell wall surface anchor [Bacillus thuringiensis serovar pulsiensis ... gi\|49330326, gi\|... - gi\|49478770\|ref\|YP_038860.1\| cell wall surface anchor family protein [Bacillus thuringiensis serovar... gi\|229124384, gi... - gi\|229124384\|ref\|ZP_04253572.1\| cell wall surface anchor [Bacillus cereus 95/8201], gi\|228659036\|gb\|...	1.0E-24	[1..148]	[1..148]
gi\|52140688, gi\|... - gi\|52140688\|ref\|YP_086141.1\| cell wall surface anchor family protein [Bacillus cereus E33L], gi\|5197...	3.0E-24	[1..148]	[1..148]
gi\|29134779 - gi\|29134779\|dbj\|BAC66140.1\| projectin [Procambarus clarkii]	1.0E-23	[16..126]	[862..971]
ITSN2 - intersectin 2	2.0E-20	[19..144]	[648..771]

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Predicted Domain #1

Region A:
Residues: [1-148]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKKLLPICA IALLTVGYSS VASADTGTVT KEEATQLQQD KAKKEAAIKE QQKIEEEKKR  60
   61 IAQEQLKNDM AKKEEAIKAQ QKSEEGKKEA AQVQPKNAAT KKEVAKPAVQ GEKLPNTASN 120
  121 NVAMMALSAC LVGIGTLFGL KRRNKVKA

[Run NCBI BLAST on this sequence.]

Detection Method:	FFAS03
Confidence:	1.31
Match:	2j63A
Description:	No description for 2j63A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits