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View Structure Prediction Details

Protein: gi|30259485, gi|...
Organism: Bacillus anthracis str. Ames
Length: 393 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30259485, gi|....

Description E-value Query
Range
Subject
Range
gi|118791508, gi... - gi|118791508|ref|XP_552951.2| AGAP009036-PA [Anopheles gambiae str. PEST], gi|116117635|gb|EAL39028....
AGAP009036-PA - solute carrier family 9 (sodium/hydrogen exchanger), member 3|protein_coding|3R:24426421:24457340:1|...
2.0E-57 [6..386] [248..654]
gi|37727744 - gi|37727744|gb|AAO34131.1| alkali metal ion/proton exchanger 3 [Anopheles gambiae]
2.0E-57 [6..386] [248..653]
gi|32450774 - gi|32450774|gb|AAM63432.1| Na+/H+ exchanger [Aedes aegypti]
3.0E-57 [6..386] [252..658]
Nhe2-PB, Nhe2-PA - The gene Na<sup>+</sup>/H<sup>+</sup> hydrogen exchanger 2 is referred to in FlyBase by the symbol D...
7.0E-57 [6..386] [197..605]
gi|125987481, gi... - gi|54645835|gb|EAL34573.1| GA21648-PA [Drosophila pseudoobscura], gi|125987481|ref|XP_001357503.1| G...
1.0E-55 [6..386] [194..602]

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Predicted Domain #1
Region A:
Residues: [1-180]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDTLIFEVGT ALVLVAFAAI LAAKLKFSII PFLIILGMLV GPHAPDLGLI DLRFIESGEV  60
   61 ISFLGRVGVI FLLFYLGLEF SIKKLIKSGK SIAFGGTVHI SLNFLLGLLY GYVMGFPLLE 120
  121 TLIIAGIITI SSSAIVAKVI VDLRRSGNKE TELILGIIMF DDIFLAVYLS VVSGLVLGGA 180
  181 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [181-393]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TSFAGALTSV LIAVGYMLLF FVIARKATPF LNKVLDISSN EIFIIVIFAI LFFVAGFSET  60
   61 IHVAEAIGAL LLGLVFSETE HSDRIEKLVV PFRDFFGAIF FFSFGLSIDP FSLGGAVWLA 120
  121 LGAVFITIIG NFTAGMIAGS KAGLSHKAST NIGLTLVSRG EFSIIVANIG IAGGLMAAIK 180
  181 PFSALYVLIL ASLGPLLTKE SGRIYSLLDK LFK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle