YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30264738, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	214 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30264738, gi|....

Description	E-value	Query Range	Subject Range
gi\|89157735, gi\|... - gi\|89204162\|ref\|ZP_01182740.1\| CBS:Amino acid-binding ACT [Bacillus weihenstephanensis KBAB4], gi\|89... gi\|228647968, gi... - gi\|229135503\|ref\|ZP_04264289.1\| Acetoin utilization protein AcuB [Bacillus cereus BDRD-ST196], gi\|22... gi\|229019894, gi... - gi\|229019894\|ref\|ZP_04176692.1\| Acetoin utilization protein AcuB [Bacillus cereus AH1273], gi\|228741...	1.0E-31	[1..214]	[1..214]
gi\|228903181, gi... - gi\|228903181\|ref\|ZP_04067315.1\| Acetoin utilization protein AcuB [Bacillus thuringiensis IBL 4222], ... gi\|228910518, gi... - gi\|228910518\|ref\|ZP_04074332.1\| Acetoin utilization protein AcuB [Bacillus thuringiensis IBL 200], g... gi\|206969647, gi... - gi\|206969647\|ref\|ZP_03230601.1\| acetoin utilization protein AcuB [Bacillus cereus AH1134], gi\|206735... gi\|228836242, gi... - gi\|228923421\|ref\|ZP_04086708.1\| Acetoin utilization protein AcuB [Bacillus thuringiensis serovar hua... gi\|228941845, gi... - gi\|228941845\|ref\|ZP_04104392.1\| Acetoin utilization protein AcuB [Bacillus thuringiensis serovar ber... gi\|228960935, gi... - gi\|228960935\|ref\|ZP_04122568.1\| Acetoin utilization protein AcuB [Bacillus thuringiensis serovar pak... gi\|228785173, gi... - gi\|228974770\|ref\|ZP_04135336.1\| Acetoin utilization protein AcuB [Bacillus thuringiensis serovar thu... gi\|228778565, gi... - gi\|228981365\|ref\|ZP_04141665.1\| Acetoin utilization protein AcuB [Bacillus thuringiensis Bt407], gi\|... gi\|218160197, gi... - gi\|218232240\|ref\|YP_002369463.1\| acetoin utilization protein AcuB [Bacillus cereus B4264], gi\|218160... gi\|228723097, gi... - gi\|229048372\|ref\|ZP_04193940.1\| Acetoin utilization protein AcuB [Bacillus cereus AH676], gi\|2287230... gi\|218542514, gi... - gi\|218899819\|ref\|YP_002448230.1\| acetoin utilization protein AcuB [Bacillus cereus G9842], gi\|218542... gi\|229072171, gi... - gi\|229072171\|ref\|ZP_04205379.1\| Acetoin utilization protein AcuB [Bacillus cereus F65185], gi\|228710... gi\|229081923, gi... - gi\|229081923\|ref\|ZP_04214415.1\| Acetoin utilization protein AcuB [Bacillus cereus Rock4-2], gi\|22870... gi\|229112131, gi... - gi\|229112131\|ref\|ZP_04241674.1\| Acetoin utilization protein AcuB [Bacillus cereus Rock1-15], gi\|2286... gi\|228653637, gi... - gi\|229129946\|ref\|ZP_04258912.1\| Acetoin utilization protein AcuB [Bacillus cereus BDRD-Cer4], gi\|228... gi\|74491782, gi\|... - gi\|75760727\|ref\|ZP_00740750.1\| Acetoin utilization acuB protein [Bacillus thuringiensis serovar isra... gi\|229147232, gi... - gi\|229147232\|ref\|ZP_04275589.1\| Acetoin utilization protein AcuB [Bacillus cereus BDRD-ST24], gi\|228... gi\|228630685, gi... - gi\|229152865\|ref\|ZP_04281048.1\| Acetoin utilization protein AcuB [Bacillus cereus m1550], gi\|2286306... gi\|30022736, gi\|... - gi\|30022736\|ref\|NP_834367.1\| acetoin utilization protein AcuB [Bacillus cereus ATCC 14579], gi\|29898...	1.0E-31	[1..214]	[1..214]
gi\|218905894, gi... - gi\|218905894\|ref\|YP_002453728.1\| acetoin utilization protein AcuB [Bacillus cereus AH820], gi\|218539... gi\|196043905, gi... - gi\|196043905\|ref\|ZP_03111142.1\| acetoin utilization protein AcuB [Bacillus cereus 03BB108], gi\|19602... gi\|196032890, gi... - gi\|196032890\|ref\|ZP_03100303.1\| acetoin utilization protein AcuB [Bacillus cereus W], gi\|195994319\|g... gi\|49481425, gi\|... - gi\|49481425\|ref\|YP_038711.1\| acetoin utilization protein [Bacillus thuringiensis serovar konkukian s... gi\|228659535, gi... - gi\|229124233\|ref\|ZP_04253425.1\| Acetoin utilization protein AcuB [Bacillus cereus 95/8201], gi\|22865... gi\|52140839, gi\|... - gi\|52140839\|ref\|YP_085991.1\| acetoin utilization protein [Bacillus cereus E33L], gi\|51974308\|gb\|AAU1... gi\|228948412, gi... - gi\|228948412\|ref\|ZP_04110695.1\| Acetoin utilization protein AcuB [Bacillus thuringiensis serovar mon... gi\|228842355, gi... - gi\|228917314\|ref\|ZP_04080869.1\| Acetoin utilization protein AcuB [Bacillus thuringiensis serovar pul... gi\|118479807, gi... - gi\|118479807\|ref\|YP_896958.1\| acetoin utilization protein [Bacillus thuringiensis str. Al Hakam], gi... gi\|228584661, gi... - gi\|229198825\|ref\|ZP_04325519.1\| Acetoin utilization protein AcuB [Bacillus cereus m1293], gi\|2285846... gi\|228596662, gi... - gi\|229186925\|ref\|ZP_04314080.1\| Acetoin utilization protein AcuB [Bacillus cereus BGSC 6E1], gi\|2285...	1.0E-31	[1..214]	[1..214]
gi\|229076174, gi... - gi\|229076174\|ref\|ZP_04209142.1\| Acetoin utilization protein AcuB [Bacillus cereus Rock4-18], gi\|2287... gi\|228608211, gi... - gi\|229175379\|ref\|ZP_04302894.1\| Acetoin utilization protein AcuB [Bacillus cereus MM3], gi\|228608211... gi\|229118155, gi... - gi\|229118155\|ref\|ZP_04247514.1\| Acetoin utilization protein AcuB [Bacillus cereus Rock1-3], gi\|22866... gi\|229093766, gi... - gi\|229093766\|ref\|ZP_04224865.1\| Acetoin utilization protein AcuB [Bacillus cereus Rock3-42], gi\|2286... gi\|42739779, gi\|... - gi\|42783849\|ref\|NP_981096.1\| acetoin utilization protein AcuB [Bacillus cereus ATCC 10987], gi\|42739...	2.0E-31	[1..214]	[1..214]
gi\|229158271, gi... - gi\|229158271\|ref\|ZP_04286338.1\| Acetoin utilization protein AcuB [Bacillus cereus ATCC 4342], gi\|228... gi\|47557869, gi\|... - gi\|47565083\|ref\|ZP_00236126.1\| acetoin utilization protein AcuB, probable, putative [Bacillus cereus...	2.0E-31	[1..214]	[1..214]
gi\|56421343, gi\|... - gi\|56421343\|ref\|YP_148661.1\| acetoin utilization protein [Geobacillus kaustophilus HTA426], gi\|56381...	5.0E-31	[1..209]	[1..209]
gi\|53796446 - ref\|ZP_00357413.1\| COG0516: IMP dehydrogenase/GMP reductase [Chloroflexus aurantiacus] gi\|163667490, gi... - gi\|76259769\|ref\|ZP_00767414.1\| IMP dehydrogenase [Chloroflexus aurantiacus J-10-fl], gi\|76165345\|gb\|... gi\|222523951, gi... - gi\|222523951\|ref\|YP_002568421.1\| inosine-5'-monophosphate dehydrogenase [Chloroflexus sp. Y-400-fl],...	7.0E-31	[7..214]	[98..287]
gi\|66782337, gi\|... - gi\|94984655\|ref\|YP_604019.1\| inosine-5'-monophosphate dehydrogenase [Deinococcus geothermalis DSM 11...	1.0E-30	[7..212]	[157..343]
IMDH_AQUAE - Inosine-5'-monophosphate dehydrogenase OS=Aquifex aeolicus GN=guaB PE=3 SV=1 IMDH_AQUAE - Inosine-5'-monophosphate dehydrogenase OS=Aquifex aeolicus (strain VF5) GN=guaB PE=3 SV=1	3.0E-30	[7..213]	[96..286]
gi\|152977031, gi... - gi\|89201624\|ref\|ZP_01180362.1\| CBS:Amino acid-binding ACT [Bacillus cereus subsp. cytotoxis NVH 391-...	6.0E-30	[1..214]	[1..214]

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Predicted Domain #1

Region A:
Residues: [1-214]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIVEEIMNQD VVTLRPNDTI ETAIRTIRTK GIRHIPIVDQ NNHVVGIISD RDVRDASPSI  60
   61 LDEQVSLDML KQPLELIMKH PVMTCHPLDF VEEIATLFFE NKIGCLPVTK AGKLVGIISE 120
  121 STVLHTLVKL TGAHQPSSQI EIQVKNEPGI LGKVVAIFSE LQINIVSVLV YPAKDENDKV 180
  181 LVFRIQTMNP LKVIDALEAE GYRVLWPNIM GMQA

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	28.69897
Match:	1vrdA
Description:	Crystal structure of Inosine-5'-monophosphate dehydrogenase (TM1347) from THERMOTOGA MARITIMA at 2.18 A resolution
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits