YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30259329, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	200 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30259329, gi|....

Description	E-value	Query Range	Subject Range
COAE_GEOKA - Dephospho-CoA kinase OS=Geobacillus kaustophilus (strain HTA426) GN=coaE PE=3 SV=1 COAE_GEOKA - Dephospho-CoA kinase OS=Geobacillus kaustophilus GN=coaE PE=3 SV=1	4.0E-43	[1..200]	[1..200]
gi\|65321951 - gi\|65321951\|ref\|ZP_00394910.1\| COG0237: Dephospho-CoA kinase [Bacillus anthracis str. A2012] gi\|228917222, gi... - gi\|228917222\|ref\|ZP_04080779.1\| Dephospho-CoA kinase [Bacillus thuringiensis serovar pulsiensis BGSC... gi\|229124150, gi... - gi\|229124150\|ref\|ZP_04253342.1\| Dephospho-CoA kinase [Bacillus cereus 95/8201], gi\|228659452\|gb\|EEL1... gi\|228830018, gi... - gi\|228929631\|ref\|ZP_04092649.1\| Dephospho-CoA kinase [Bacillus thuringiensis serovar pondicheriensis...	1.0E-42	[1..200]	[2..201]
COAE_BACHK - Dephospho-CoA kinase OS=Bacillus thuringiensis subsp. konkukian (strain 97-27) GN=coaE PE=3 SV=1 COAE_BACHK - Dephospho-CoA kinase OS=Bacillus thuringiensis subsp. konkukian GN=coaE PE=3 SV=1	2.0E-42	[1..200]	[1..200]
COAE_BACCZ - Dephospho-CoA kinase OS=Bacillus cereus (strain ZK / E33L) GN=coaE PE=3 SV=1	2.0E-42	[1..200]	[1..200]
gi\|47564993, gi\|... - gi\|47564993\|ref\|ZP_00236036.1\| dephospho-CoA kinase [Bacillus cereus G9241], gi\|47557779\|gb\|EAL16104...	5.0E-42	[1..200]	[1..200]
gi\|47214587 - gi\|47214587\|emb\|CAG00941.1\| unnamed protein product [Tetraodon nigroviridis]	6.0E-42	[2..197]	[1..197]
gi\|89201561, gi\|... - gi\|89201561\|ref\|ZP_01180299.1\| Dephospho-CoA kinase [Bacillus cereus subsp. cytotoxis NVH 391-98], g...	1.0E-41	[1..200]	[1..200]
COAE_BACC1 - Dephospho-CoA kinase OS=Bacillus cereus (strain ATCC 10987 / NRS 248) GN=coaE PE=3 SV=1	2.0E-41	[1..200]	[1..200]
gi\|227884993, gi... - gi\|227884993\|ref\|ZP_04002798.1\| dephospho-CoA kinase [Escherichia coli 83972], gi\|227838131\|gb\|EEJ48... COAE_ECOL6 - Dephospho-CoA kinase OS=Escherichia coli O6 GN=coaE PE=3 SV=1 COAE_ECOL6 - Dephospho-CoA kinase OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=coaE PE=3 SV=...	3.0E-41	[1..199]	[1..196]
gi\|75762011, gi\|... - gi\|75762011\|ref\|ZP_00741925.1\| Dephospho-CoA kinase [Bacillus thuringiensis serovar israelensis ATCC... gi\|228967681, gi... - gi\|228967681\|ref\|ZP_04128701.1\| Dephospho-CoA kinase [Bacillus thuringiensis serovar sotto str. T040...	3.0E-41	[1..200]	[6..205]

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Predicted Domain #1

Region A:
Residues: [1-200]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTVVIGLTGG IASGKSTVSQ MFRELSIPVI DADIIAREVV EKGKPAYNKI VEVFGTEVLQ  60
   61 EDGELDRPKL GSVVFYNEEK RLQLNKIVHP AVREEMNRQK EMYIKEGMQA VVLDIPLLFE 120
  121 SKLTSLVDRV LVVAVKPHTQ LERLMKRNNF SEEEATARIQ SQMPLEEKVK NADEVINNDG 180
  181 TIMGTKTQLQ AILKKWNIID

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	41.221849
Match:	1n3bA
Description:	Dephospho-CoA kinase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
catalytic activity	1.00104173493322	bayes_pls_golite062009
dephospho-CoA kinase activity	0.656417599253142	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: